Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1958 ATGCAATCAAGGGTTTTGACCCTTGAAGAGGGAAAGGAGAGAATCAACCAATCTAATAAGCCTTTGAGACCAGTGCGGTTACTTGTGTTGTTTTTTGCTCTATGTGTTCTGTTCTCAGTGATCAGCATATACACTGTTAAGCATTTTGGAATTGAGAGTGTGGTGACCACAATGAGTTCTAGTTTTCAGCCATGTTATTATGAGGAACCTGGTGGTTTGGATAAGTGGATTAGGCCACCTTCAAGCCTGATCCACAATATGAGTGACGAAGAGCTTCTTTGGAGGGCTTCCTTTGTTCCAAGGATCAAGGGTTACCCTTATCCTAGAGTTCCCAAGATTGCATTCATGTTCTTGACCAAGGGACCATTGCCTCTGGCACCCCTTTGGGAGAGGTTTCTCAAGGGGCATGAGAAGTTTTATTCCATATATATTCATTCACTGCCCTCATATCAACCTCAGTTTCCTCCTTCATCTGTCTTTTACAGCAGGCAAATCCCTAGCCAGGTTTCTGAGTGGGGAAGGATGAGCATGTGCGATGCTGAAAGAAGACTCCTTGCTAATGCATTGCTTGATATCTCCAACGAGTGGTTTATTCTGCTGTCTGAATCATGCATCCCCCTCTACAATTTCAGCTTTGTCTACCACTACATAATGAAATCCAAGCACAGCTTCGTGGGTGCATTTGATGATCCCGGTCCATACGGAAGAGGGCGCTACAACGAGCACATGGCCCCTCTGGTGAATGTCACCAAGTGGCGCAAGGGCTCTCAATGGTTCGAAGTAAACCGGAAGCTCGCCATCACCATAGTTGAAGACACTACATTTCATCCAATATTTGAACAATATTGTAGGCCGGCTTGTTACGTTGATGAGCACTATTTCCCCACCATGCTCACCATTCAAGCAGCCAATGTGTTGGCGAACAGGAGCATAACTTGGGTGGACTGGTCTAGGGGTGGAGCTCACCCTGCTACATTTGGAAGAAATGATATCACTGAGGAGTTTTTCAATCGAGTTCGCAGAGGTCACACTTGCCTATACAACAATAGAAACTCTTCAGTTTGTGCTCTTTTTGCCAGAAAATTTGCTCCTAGTGCTTTGGAACCTTTGTTACATATGGTGGATTCAAAGGTTTTGGACTTTTGA 1146 0.4485 MQSRVLTLEEGKERINQSNKPLRPVRLLVLFFALCVLFSVISIYTVKHFGIESVVTTMSSSFQPCYYEEPGGLDKWIRPPSSLIHNMSDEELLWRASFVPRIKGYPYPRVPKIAFMFLTKGPLPLAPLWERFLKGHEKFYSIYIHSLPSYQPQFPPSSVFYSRQIPSQVSEWGRMSMCDAERRLLANALLDISNEWFILLSESCIPLYNFSFVYHYIMKSKHSFVGAFDDPGPYGRGRYNEHMAPLVNVTKWRKGSQWFEVNRKLAITIVEDTTFHPIFEQYCRPACYVDEHYFPTMLTIQAANVLANRSITWVDWSRGGAHPATFGRNDITEEFFNRVRRGHTCLYNNRNSSVCALFARKFAPSALEPLLHMVDSKVLDF* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1958 381 Pfam Core-2/I-Branching enzyme 113 339 IPR003406 GO:0016020|GO:0016757
Gso17g1958 381 PANTHER - 4 375 - -
Gso17g1958 381 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 4 375 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1958 Gso-Chr17 38775090 38779397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1958 - - gmx:100785919 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0818 14 8943867 8948121 Gso17g1958 17 38775090 38779397 GST