Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1956 ATGGCCACTCTTCTTCTTCCCACGCTCCTCCTTCTCATACCCTTCGCCACCCTCGTCTCCGCCCGCCCTCACCTCGCCGGAGACTTTCTCCGACTGCCCTCCGAAACCGATAACGATGACAACGTCCAGGGCACCCGCTGGGCCGTCCTCCTCGCCGGTTCCAATGGCTACTGGAATTACAGACATCAGGCTGATGTTTGTCACGCCTATCAAATACTAAGGAAAGGTGGCCTGAAAGAAGAAAATATTATTGTTTTTATGTATGATGACATTGCATTCAATGGGGAAAACCCAAGGCCTGGAGTCATCATTAACAAACCAGATGGAGGTGATGTTTATGAAGGAGTTCCAAAGGATTACACCGGCGAAGATGTTACTGTTGGTAACTTTTTTGCTGCTTTACTTGGAAACAAGTCGGCACTTACTGGTGGCAGTGGGAAGGTTGTGGACAGTGGACCTGATGATCATATATTTGTATACTATACTGACCATGGAGGTCCAGGGGTGCTCGGGATGCCTGCTGGTCCTTACTTATATGCGGATGATCTGATTGAAGTCTTGAAGAAAAAACATGCTTCTGGAACGTATAAAAACCTAGTATTTTATCTGGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCCGAAGATATCAATATTTATGCAACCACAGCTTCCAATGCAGAAGAAAGTAGTTGGGGAACATATTGCCCTGGGGAGTATCCTAGTCCTCCCCCAGAATATTCAACCTGCTTGGGTGATCTGTACAGTGTTGCTTGGATGGAAGACAGTGACAGACACAATTTACGAACAGAAACTCTGCATCAACAATATAAATTGGTTAAAGAGAGGACTATATCTGGAGATTCATACTATGGCTCTCACGTGATGCAGTATGGTGATGTACGGCTTAGCAGTGATGTTCTCTTCCATTATTTGGGTACAGATCCTGCTAATGATAATTTCACTTTTGTGGACGAAAACTCCTTATGGTCACCTTCAAAACCAGTCAACCAACGTGATGCTGATCTCATCCATTTTTGGGATAAGTTCCGCAAAGCTCCTGAGGGTTCTCTCAGGAAAAATGCAGCTCAGAAACAAGTTTTGGAAGCAATGTCTCATAGAATGCATGTAGACAACAGTGTAAAACTTATTGGGAAGCTTTTATTTGGTATTGAAAAGGGTCCAGAAGTACTCAACGCTGTTAGACCGGCAGGATCGGCACTTGTTGATGATTGGCACTGCCTTAAAACCATGGTGAGGACTTTTGAGACACATTGTGGATCCTTGTCTCAGTATGGCATGAAACATATGAGGTCCTTTGCAAACATCTGCAATGTAGGGATAAAGAATGAGCAAATGGCTGAGGCCTCTGCACAAGCTTGTGTCTCTATTCCTTCCAATCCTTGGAGTTCTCTGCAAAGGGGTTTCAGTGCATAA 1446 0.4474 MATLLLPTLLLLIPFATLVSARPHLAGDFLRLPSETDNDDNVQGTRWAVLLAGSNGYWNYRHQADVCHAYQILRKGGLKEENIIVFMYDDIAFNGENPRPGVIINKPDGGDVYEGVPKDYTGEDVTVGNFFAALLGNKSALTGGSGKVVDSGPDDHIFVYYTDHGGPGVLGMPAGPYLYADDLIEVLKKKHASGTYKNLVFYLEACESGSIFEGLLPEDINIYATTASNAEESSWGTYCPGEYPSPPPEYSTCLGDLYSVAWMEDSDRHNLRTETLHQQYKLVKERTISGDSYYGSHVMQYGDVRLSSDVLFHYLGTDPANDNFTFVDENSLWSPSKPVNQRDADLIHFWDKFRKAPEGSLRKNAAQKQVLEAMSHRMHVDNSVKLIGKLLFGIEKGPEVLNAVRPAGSALVDDWHCLKTMVRTFETHCGSLSQYGMKHMRSFANICNVGIKNEQMAEASAQACVSIPSNPWSSLQRGFSA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1956 481 PRINTS Hemoglobinase (C13) cysteine protease signature 47 71 IPR001096 GO:0006508|GO:0008233
Gso17g1956 481 PRINTS Hemoglobinase (C13) cysteine protease signature 72 101 IPR001096 GO:0006508|GO:0008233
Gso17g1956 481 PRINTS Hemoglobinase (C13) cysteine protease signature 119 134 IPR001096 GO:0006508|GO:0008233
Gso17g1956 481 PRINTS Hemoglobinase (C13) cysteine protease signature 147 166 IPR001096 GO:0006508|GO:0008233
Gso17g1956 481 PRINTS Hemoglobinase (C13) cysteine protease signature 196 212 IPR001096 GO:0006508|GO:0008233
Gso17g1956 481 PIRSF AE 1 481 IPR043577 GO:0004197|GO:0051603
Gso17g1956 481 PANTHER HEMOGLOBINASE FAMILY MEMBER 1 480 IPR001096 GO:0006508|GO:0008233
Gso17g1956 481 PIRSF Legumain 1 481 IPR001096 GO:0006508|GO:0008233
Gso17g1956 481 Pfam Peptidase C13 family 46 316 IPR001096 GO:0006508|GO:0008233
Gso17g1956 481 PANTHER VACUOLAR-PROCESSING ENZYME 1 480 - -
Gso17g1956 481 Gene3D - 44 340 - -
Gso17g1956 481 Gene3D - 341 469 IPR046427 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1956 Gso-Chr17 38746432 38752860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1956 K01369 - gmx:100784318 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0820 14 8988239 8995524 Gso17g1956 17 38746432 38752860 GST