Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0813 ATGGCTTCTTCTTCTCCTTCTCCTCCATCTTATCTCACACACCTTCCTCTTCATCCCTCTCACCAAGGTGAGAGTGAGAAGCGCGTGGAGGACGATGAATCGCGCGTTCCGATTCACATCGTGACCGCGGCGACGCAACTTCCCGTCGAATTTCTGGAACCCTCGCCTCAATCCAAGCTCGTCATCGGCTTTGACTGCGAGGGCGTTGACCTGTGTCGCAAAGGCACTCTCTGCGTAATGCAGCTTGCATTTCCGGATGCTGTGTACTTGGTTGATGCGATTGAAGGGGGAGAGGAGCTTATCATAGCGTGTAAGCCTGCACTTGAGTCTAATTACATCACAAAAGTGATTCATGATTGCAAACGGGACAGTGAGGCATTATACTTTCAGTTTGGCATCAAGTTGAACAACGTAGTGGATACCCAGATTGCTTATTCACTTATAGAGGAGCAAGAAGGACGAAAGAGATTGCGAGATGACTACATTTCATTTGTTGGCCTCCTTGCAGATCCACGTTATTGTGGCATATCATATGATGAGAAGGAAGAAGTTCGTGTCCTTCTTCGACAGGACCCCAAGTTTTGGACACACAGACCATTATCTGAACAAATGATCCGTGCTGCTGCTGATGATGTTCGTTTTCTTCTCTATATTTATCGCCAAATGATGGAGAAATTAAATGAGCGGTCTTTATGGTATCTTGCAGTCCATGGTGCCTTGTATTGCCGATGTTTCTGTTTGAATAGTAACAATTTTGCTGATTGGCCATCTCTACCTTCAATTCCAGATAACCTGAATGCTGATGGAAATGATCTCGAGGAAGAAATTCTTTCAGTTCTTGATATTCCCCAAGGAAAGATGGGACTTGTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAATGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAGGTCTTCATCATCGGACCGGTGAAGGAGGTGAGGAAAGCCGAGGCCATGATTCGGGGTAGAATCTTGGATATATAG 1035 0.4618 MASSSPSPPSYLTHLPLHPSHQGESEKRVEDDESRVPIHIVTAATQLPVEFLEPSPQSKLVIGFDCEGVDLCRKGTLCVMQLAFPDAVYLVDAIEGGEELIIACKPALESNYITKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRLRDDYISFVGLLADPRYCGISYDEKEEVRVLLRQDPKFWTHRPLSEQMIRAAADDVRFLLYIYRQMMEKLNERSLWYLAVHGALYCRCFCLNSNNFADWPSLPSIPDNLNADGNDLEEEILSVLDIPQGKMGLVIGKRGATILSIKRSCNAEILTGGPKGPPDKVFIIGPVKEVRKAEAMIRGRILDI* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0813 344 CDD KH-I 280 337 - -
Gso14g0813 344 PANTHER EGALITARIAN, ISOFORM B 12 342 - -
Gso14g0813 344 SUPERFAMILY Ribonuclease H-like 12 242 IPR012337 -
Gso14g0813 344 Gene3D K Homology domain, type 1 265 342 IPR036612 GO:0003723
Gso14g0813 344 ProSiteProfiles Type-1 KH domain profile. 275 337 - -
Gso14g0813 344 MobiDBLite consensus disorder prediction 1 33 - -
Gso14g0813 344 Pfam 3'-5' exonuclease 57 226 IPR002562 GO:0003676|GO:0006139|GO:0008408
Gso14g0813 344 PANTHER - 12 342 - -
Gso14g0813 344 SMART 35exoneu6 38 227 IPR002562 GO:0003676|GO:0006139|GO:0008408
Gso14g0813 344 SMART kh_6 274 342 IPR004087 GO:0003676
Gso14g0813 344 Pfam KH domain 280 338 IPR004088 GO:0003723
Gso14g0813 344 CDD Egl_like_exo 51 246 - -
Gso14g0813 344 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 270 342 IPR036612 GO:0003723
Gso14g0813 344 Gene3D - 4 243 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0813 Gso-Chr14 8871572 8878837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0813 K18740 - gmx:100810098 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0813 14 8871572 8878837 Gso17g1963 17 38814448 38821678 GST