Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0810 ATGAAGAGGTTCTCTGCCTGCTGCTTCACAAGCAGAATCTCTAAGTTTCACTCCCACTGGAAGCGCAACCATTCTCGGTCTCAGATCATGGCAGGAATCATCTCTGGCCCAAGTGGGAGCGAGGGTGTTAATATTTTACTTAATCATGACTTCTCTAGTGAGCTGAACTCTTGGCATCTCAATAACTGCACTGGCTATGTAATTTCGGCTGAATCAGGTAATCAAGGGGGAATTTCAATGGAGTCGAATGTTAATTATGTTGTTATCACCGACCGAAAGGAATGTTGGCAAGGTCTTGAGCAAGACATTACCAACAGAATTTCCATTGGTTCCACTTACACGGTTTCGGCTTGTGTGGGAGTTTCTGGGCTTTCTCAGCGATCTAGTGATGTTATAGCTACTCTGAAACTAGAATATCATGATTCAGCTACTAGATACTTGTTCATTGGAAGAACTTCTGTTAATAAGGATAGCTGGGAAAAGTTGGAAGGGACATTCTCATTGTCAACTATGCCTCATAGGGTTATATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACCTGCTAATACGATCAGTAGAGATCAACTGTTCCACTCCAAATAATAGTACCACAAGCACAGGATGTGTTTCAGCTGGAGATGACAACATCATAATTAACCCCCAATTTGATGATGGTCTGAATAACTGGTCTGGAAGAGGCTGCAAGATTATGTTGCATGATTCCATGAATGATGGGAAAATTGTTCCAAAGTCTGGGAAATTCTTTGCATCTGCAACAGAACGCACACAAAGCTGGAATGGAATTCAGCAAGAGATCACTGGACGCGTGCAGCGCAAACTGGCCTATGAGGTCACTGCTTTAGTTAGAATATTTGGAAACAATGTCTCTACTGCTGATGTACGGGCTACTTTGTGGGTCCAAACACCAGATCTTCGAGAGCAGTATATAGGCATTGCAAAGGTGCAGGCAACAGATAAAGATTGGGTTACAATGCAGGGAAAATTCCTTCTAAATGGTTCTCCATCGAAAGTGGTCCTTTATTTAGAGGGCCCCCCTCCAGGCACTGACATTCTTCTCAATAATTTGATCTTAAAGCATGCAGCTAAAACACCTCCTTCAACCCCACCGGATTTAAAGAATATTGCTTTTGGGGTTAATATAATTGAGAACAGCAATCTGGCTGATAGCACAAATGGATGGTTTCCCCTTGGCAATTGCACTTTAAGTGTTAAAACTGGTTCACCACACATAATTCCACCAATGGCAAGAGATTCTCTTGGTTCTCATGAGTTCCTAAGCGGGCGATACATCCTTGTAACTAATCGAACGCAAACATGGATGGGTCCTGCTCAAACTATCACTGATAAAGTTAAACTCTTTGTGACTTATCAAGTGTCTGCTTGGGTCCGGATTGGCTCAGGATCATCCGGGCCTCAGAATGTGAATGTTGCCCTTGGTGTTGACAACCAGTGGGTCAATGGAGGACAAACTCAGGTTTCGGATGACATGTGGCATGAAATTGGAGGGTCCTTTAGAATTGAAAAGCAGCCATCAAAGGTTATGGTTTATGTCCAAGGTCCTGCTTCTGGTGTGGACTTAATGGTTGCTGGACTTCAAATTTTTCCTGTGGATAGACACACAAGATTTAGATATTTAAAGATCCAAACTGATAAGATTCGTAAACGTGATGTTATCCTGAAATTCTCTGGACTGGACTCTGGCAGCTATGCTAACACCTCGGTAAAAGTTATACAAACACAGAATGATTTCCCAATTGGAACATGCATCAGTAGAATGAACATTGACAATGAGGACTTTGTTAACTTCGTTGTGAAGCATTTTAACTGGGCTGTGTTTGAAAATGAGTTGAAGTGGTATTGGACTGAGCCACAACAAGGAAATTTCAATTACAAAGATGCTGATAATCTGCTAAGCTTGTGTCAGAAGCACAAGATACAAACTCGCGGTCATTGTATCTTCTGGGAAGTGGATGAAACTGTTCAGCAGTGGATCAAGTCACTGAACAAAAACGATTTGATGACGGCTGTCCAAAACCGCCTAAACGGCCTGCTGACTCGCTACAAGGGCAAGTTCAGTCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAAGACAGGCTAGGCAAGGATATAAGGGCAAACATGTTCAAGACTGCAAACCAACTAGACCCTTCTGCCACACTCTTTGTGAATGATTACCACGTTGAAGATGGACGTGACACCAGATCGAGTCCAGATAAGTACATCCATCACATTCTTGATTTGCAAGAGCAAGGTGCCCCAGTTGGGGGAATTGGAATTCAAGGCCACATAGATAGTCCAATAGGGCCTATTGTTAGTTCTTCCCTTGACAAGTTGGGTATTCTTGGTCTACCTATATGGTTCACTGAGCTTGATGTGTCTTCCGTCAATGAATATGTTAGAGCAGATGATCTTGAAGTTATGCTACGCGAAGCCATGGCTCATCCTACGGTGGAAGGCATAATGCTGTGGGGATTTTGGGAGTTGTTTATGAGTAGGGACAATTCACACTTGGTGAATGCAGAAGGTGACATCAATGAGGCTGGGAAAAGGTTCTTATCTCTTAAACAAGAGTGGCTTTCTCATAGCCGTGGCCATGTTGATGAGCAAGGTCAATACAACTTCAGAGGCTTTCATGGAACATATGATGTGCAAGTTGTGACCCCATCAAAGAAAATTTCTAAGACATTTGTGCTTGACAAAGGTGACTCGCCACTAGTGGTATCCATTGATTTATAA 2793 0.4264 MKRFSACCFTSRISKFHSHWKRNHSRSQIMAGIISGPSGSEGVNILLNHDFSSELNSWHLNNCTGYVISAESGNQGGISMESNVNYVVITDRKECWQGLEQDITNRISIGSTYTVSACVGVSGLSQRSSDVIATLKLEYHDSATRYLFIGRTSVNKDSWEKLEGTFSLSTMPHRVIFYLEGPAPGVDLLIRSVEINCSTPNNSTTSTGCVSAGDDNIIINPQFDDGLNNWSGRGCKIMLHDSMNDGKIVPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVRIFGNNVSTADVRATLWVQTPDLREQYIGIAKVQATDKDWVTMQGKFLLNGSPSKVVLYLEGPPPGTDILLNNLILKHAAKTPPSTPPDLKNIAFGVNIIENSNLADSTNGWFPLGNCTLSVKTGSPHIIPPMARDSLGSHEFLSGRYILVTNRTQTWMGPAQTITDKVKLFVTYQVSAWVRIGSGSSGPQNVNVALGVDNQWVNGGQTQVSDDMWHEIGGSFRIEKQPSKVMVYVQGPASGVDLMVAGLQIFPVDRHTRFRYLKIQTDKIRKRDVILKFSGLDSGSYANTSVKVIQTQNDFPIGTCISRMNIDNEDFVNFVVKHFNWAVFENELKWYWTEPQQGNFNYKDADNLLSLCQKHKIQTRGHCIFWEVDETVQQWIKSLNKNDLMTAVQNRLNGLLTRYKGKFSHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDPSATLFVNDYHVEDGRDTRSSPDKYIHHILDLQEQGAPVGGIGIQGHIDSPIGPIVSSSLDKLGILGLPIWFTELDVSSVNEYVRADDLEVMLREAMAHPTVEGIMLWGFWELFMSRDNSHLVNAEGDINEAGKRFLSLKQEWLSHSRGHVDEQGQYNFRGFHGTYDVQVVTPSKKISKTFVLDKGDSPLVVSIDL* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0810 930 PANTHER - 205 930 - -
Gso14g0810 930 PANTHER - 37 194 - -
Gso14g0810 930 SMART glyco_10 624 874 IPR001000 GO:0004553|GO:0005975
Gso14g0810 930 SUPERFAMILY (Trans)glycosidases 578 881 IPR017853 -
Gso14g0810 930 PRINTS Glycosyl hydrolase family 10 signature 655 667 IPR001000 GO:0004553|GO:0005975
Gso14g0810 930 PRINTS Glycosyl hydrolase family 10 signature 737 748 IPR001000 GO:0004553|GO:0005975
Gso14g0810 930 PRINTS Glycosyl hydrolase family 10 signature 769 781 IPR001000 GO:0004553|GO:0005975
Gso14g0810 930 PANTHER GLYCOSYL HYDROLASE 37 194 IPR044846 GO:0004553|GO:0005975
Gso14g0810 930 PANTHER GLYCOSYL HYDROLASE 205 930 IPR044846 GO:0004553|GO:0005975
Gso14g0810 930 Gene3D Glycosidases 576 885 - -
Gso14g0810 930 SUPERFAMILY Galactose-binding domain-like 42 197 IPR008979 -
Gso14g0810 930 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 578 873 IPR001000 GO:0004553|GO:0005975
Gso14g0810 930 Pfam Glycosyl hydrolase family 10 588 844 IPR001000 GO:0004553|GO:0005975
Gso14g0810 930 Gene3D - 383 542 - -
Gso14g0810 930 Gene3D - 38 197 - -
Gso14g0810 930 Gene3D - 210 368 - -
Gso14g0810 930 Pfam Carbohydrate binding domain 44 184 IPR003305 GO:0016798
Gso14g0810 930 Pfam Carbohydrate binding domain 387 530 IPR003305 GO:0016798
Gso14g0810 930 Pfam Carbohydrate binding domain 215 352 IPR003305 GO:0016798
Gso14g0810 930 SUPERFAMILY Galactose-binding domain-like 385 546 IPR008979 -
Gso14g0810 930 SUPERFAMILY Galactose-binding domain-like 214 368 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0810 Gso-Chr14 8830347 8836514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0810 1 930 Glycoside Hydrolase AT1G58370 66.632 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0810 - - gmx:100816678 1894.4