Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0790 ATGAAGTCCATGAATGATAGCAACACCAATGATGGGAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGATGTTACTTCTTCTACTGGCGCTCCTCAACATCATCATCATCACTACTATCATCACCCTCAGGCTTCTGCTGCAGCAGCTTGCAACAACAACACTGTTCCCACTAACTTCTATATGTCACCCTCAAACCTCAACACCTCAGGAATCTGTTATGGTGTTGGAGGAAACAGTACCTTTCACACTCCTTTGGCCATGATGCCTCTCAAGTCAGATGGGTCACTTTGCATTATGGAAGCTCTCACCAGATCACAAACCCAAGTGATGATGCCAACTTCATCTCCAAAACTTGAGGACTTCCTCAGTGGTGCAACTATGGGGGCTCAAGACTATGGAACCCATGAGAGAGAAGCAATGGCTCTAAGCCTAGACAGCATCTACTACAGCAACCAGAATGCTGAACCTGAAACCAACAGAGACCATTCTTCTTCTCTGGACCTTCTTTCTGACCCTTTCAGGCACCAAAACCATTCATATTACTCAGGGCTTGGGATTTACCAAGTGGAGGAAGAAGAAACAAAGGAACAACCACCACCACCACCCCACCACGTGGCAGTTTGCTGCTCCCAAGTGCCTCAAGTGGTGGAAGGCATTGCTTGCTTCAAAAACTGGGTGCCCCCAAGGGAATTTTCTTCTTCCACTCAGCAGAATCTGGAGCAGGATCAAGTGAATAGTAGTCGTAGTGGTGGCCTTGGAGAGGATAATAATAATGGTGCTTCTGGGAATATTGGTGTTGGTAGTAGTGTTGGTTGTGGGGAGTTACAGTCTCTAAGTCTGTCTATGAGCCCTGGTTCTCAATCAAGCTGTGTCACTGTTCCAACTCAGATCTCATCTTCTGGAACTGACTCCGTGACTGTGGATGCCAAAAAGAGAGGGTCTTCTAAGCTTGGACAGAAGCAACCTGTGCATAGGAAATCCATTGACACATTTGGGCAAAGAACTTCTCAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGATATGAAGCGCATTTGTGGGATAACAGTTGCAAGAAGGAAGGGCAAACCAGGAAAGGACGACAAGTTTATTTGGGTGGTTATGACATGGAAGAGAAAGCCGCAAGGGCTTATGATCTTGCGGCTCTCAAGTATTGGGGACCTTCAACGCACATAAACTTCTCGCTAGAAAATTACCAAACTGAACTTGAAGAAATGAAGAATATGAGTAGGCAGGAATATGTGGCCCACTTGAGAAGAAAGAGTAGTGGGTTTTCAAGGGGTGCCTCAATGTACAGAGGAGTGACAAGGCACCACCAACATGGCAGGTGGCAAGCAAGGATAGGCAGAGTTGCAGGAAATAAGGACCTTTATCTTGGGACATTCAGCACTCAAGAGGAAGCTGCTGAAGCATATGATATAGCTGCAATCAAATTTCGTGGGTTGAATGCTGTCACCAACTTTGACATAACAAGATACGATGTTGAGAGAATCATGGCCAGCAACACCCTTCTAGCGGGGGAGGTAGCTAGAAGAAACAAGAATAGTGAGCCAAGAACTGAGGCCATAGAGTACAATGTTGTGTCAAGCCAACAAGTCATAAGCAACAGGGAAGAAGTTCATGAGGCTGTGAACAACAACAATAATAATGAAAATGGTTCATCTTCAGATTGGAAGATGGGTTTGTATCATCATCAGCAGCAGCAACAACAGTCAAACAACTGTGACCAGAAAACCATGAAGTGTGGAAATTATAATAGAGGTGGTGGTGGTGCTGCTGCTGCTTTCTCTGTGTCCCTACAAGATCTCATTGGGATTGAGTCAGTAGTAGGATCTAGCCAGGGCATGATGAATGAGTCCACTAAGATAGGGACTCATTTTTCAAACCCTTCCTCGCTGGTCACCAGTTTAAGCAGCTCAAGGGAAGGTAGCCCTGATAAAACGGGCCCCACTTTGCTCTTTCCAAAGCCTCCAATGGGGTCAAAGATTGTTACTAGCCCTACTATTGCTAATGGTGTCACTGTTGGCTCTTGGTTTCCCTCTCAAATGAGGCCAGTCTCAATGTCTCACTTGCCATTTTTTGCTGCTTGGAGTGATACCTAG 2145 0.4573 MKSMNDSNTNDGNNHNWLGFSLSPHMKMDVTSSTGAPQHHHHHYYHHPQASAAAACNNNTVPTNFYMSPSNLNTSGICYGVGGNSTFHTPLAMMPLKSDGSLCIMEALTRSQTQVMMPTSSPKLEDFLSGATMGAQDYGTHEREAMALSLDSIYYSNQNAEPETNRDHSSSLDLLSDPFRHQNHSYYSGLGIYQVEEEETKEQPPPPPHHVAVCCSQVPQVVEGIACFKNWVPPREFSSSTQQNLEQDQVNSSRSGGLGEDNNNGASGNIGVGSSVGCGELQSLSLSMSPGSQSSCVTVPTQISSSGTDSVTVDAKKRGSSKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSLENYQTELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVERIMASNTLLAGEVARRNKNSEPRTEAIEYNVVSSQQVISNREEVHEAVNNNNNNENGSSSDWKMGLYHHQQQQQQSNNCDQKTMKCGNYNRGGGGAAAAFSVSLQDLIGIESVVGSSQGMMNESTKIGTHFSNPSSLVTSLSSSREGSPDKTGPTLLFPKPPMGSKIVTSPTIANGVTVGSWFPSQMRPVSMSHLPFFAAWSDT* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0790 714 MobiDBLite consensus disorder prediction 637 674 - -
Gso14g0790 714 MobiDBLite consensus disorder prediction 289 314 - -
Gso14g0790 714 MobiDBLite consensus disorder prediction 238 271 - -
Gso14g0790 714 CDD AP2 444 505 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 CDD AP2 342 408 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 SMART rav1_2 445 509 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 SMART rav1_2 343 415 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 Pfam AP2 domain 343 401 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 Pfam AP2 domain 446 495 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 Gene3D AP2/ERF domain 445 505 IPR036955 GO:0003700|GO:0006355
Gso14g0790 714 Gene3D AP2/ERF domain 342 411 IPR036955 GO:0003700|GO:0006355
Gso14g0790 714 MobiDBLite consensus disorder prediction 289 331 - -
Gso14g0790 714 ProSiteProfiles AP2/ERF domain profile. 445 503 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 MobiDBLite consensus disorder prediction 637 660 - -
Gso14g0790 714 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 712 - -
Gso14g0790 714 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 13 712 - -
Gso14g0790 714 ProSiteProfiles AP2/ERF domain profile. 343 409 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 PRINTS Ethylene responsive element binding protein signature 344 355 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 PRINTS Ethylene responsive element binding protein signature 485 505 IPR001471 GO:0003700|GO:0006355
Gso14g0790 714 SUPERFAMILY DNA-binding domain 444 504 IPR016177 GO:0003677
Gso14g0790 714 SUPERFAMILY DNA-binding domain 342 410 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0790 Gso-Chr14 8464449 8469720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0790 426 714 AP2-EREBP Transcription Factor Family AT4G37750 23.734 5.04e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Gso14g0790 AP2 1.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0790 K09285 - gmx:100798179 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0790 14 8464449 8469720 Gso17g1978 17 39062075 39066921 GST
Gso14g0790 14 8464449 8469720 Gso4g0416 4 3845877 3850054 PCT
Gso14g0790 14 8464449 8469720 Gso6g0397 6 3679727 3684308 PCT
Gso4g0416 4 3845877 3850054 Gso14g0790 14 8464449 8469720 PCT
Gso6g0397 6 3679727 3684308 Gso14g0790 14 8464449 8469720 PCT