Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0787 ATGGATCTTGGGGTGGTGGGTTTGGAGGGGGTGGTGGGTTCAGAAAGTTGTTGTGTGTTTGGTTCCTCTCTTGCTTCAGATCCTGAGACAAAGCACAAATGGTACGGATCTGGTGTGCTCAAGCAAGAGAGATCTGCCATAGCAAGTGAAGATGATGAGTGGAGAACTTCTAAAGTGGCCAAAACTGATCATGACATGTCTTCTGCCTCCAAAGCAATGCTCTTTCAGCAAAGAAACAACTCTTTGTTGAGATCTAATGCTACCCTTTTCTCTGATGGCCATCATCACCAATCACAAATGTTGAGCTTCTCTTCTCCAAAGTCAGAGTCTTTGTTGGTAGATAAGGCTTCCTCAAATGCCACATTGCCTTTTTCTTACCACCAATTGTCTAGCAACACCAGAAATGCAGGTTACAGTTCAGGAAGCATAAGCATGCATGGGGCTTTGGCTGGTGTGAGAGGGCCATTCACTCCGTCACAGTGGATGGAGCTTGAACACCAAGCCTTGATCTACAAATACATCACTTCAAACGTGCCTGTGCCAACCCATCTCATACCCATTAGAAAAGCACTTGATTCTTTGGGCTTCTGCAACTTTTCAACTGGACTCCTAAGGCCCAACGCATTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACAGACCCTGAGCCAGGCAGGTGTAGGAGAACAGATGGAAAAAAATGGCGATGCTCGAGAGATGCCGTAGTGGATCAAAAGTATTGCGAGCGGCACATGAATAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATTAGGCCATGCCCTCACCACCACCACCACCACCAATACACCTAATGCTTCCTCCAACTCTACCGTGGTGCCCCGCAACACCACCACCACCACCACCTTTGCACACAACAATGTGCACCACCCTCTTCCACCTCATTCGTCTCAGGCCAACACCATCAATAGGATGTTTACAAGCAACAAAGAGAATAACAGTACCAGTGAGAGGCTGCAGGACCCTGCTCTTCCCATGCTGCCTCCCACTCTTGAGCTGAAACCAAAGGAGAACAATCCTTTCATGATTCATAAACACCACATCCCAGCTGATGAATACTCAAGGAACAGCAATGAGTTTGGACTCGTCACTTCTGATTCCTTGCTTAACCCTACACAGAAAAGAAGCTTTACTTCTTCACAAAAGGATGATTCTGAGTCCCAACAACAACATTCCCTCAGGCACTTCATTGATGACTCTCCCAAACCACAGTCTCATAATCATCACCACCATCATCATTCGTCGTCTATTTGGCCCGAACTGGACAGCATGCAATCAGACAGGACTCAGTTATCAATCTCCATACCGATATCTTCCTCAGATTTTATGTCATTCACTACTTCCTCACCCTCCAACGAGAAACTCACGTTGTCACCATTGGGGCATTCGAGGGAGTTAGACCCCATTCAAATGGAGTTGGGAATGGGAAGTGGTGCCTCCAATGAAGCAAACACCAGGCAAGCCAATTGGATTCCAATCACTTGGGAGAGTTCAATGGGTGGTCCTCTTGGAGAGGTATTGAACCTTAGCAATAACAGCAATGCAAGTGATCAATGTGGCAAGAACAACAACACTTCAGCTCTCAACCTCATGAAAGATGGGTGGGACAATAATCCTCCACTAGGGTCATCCCCAACTGGGGTGCTTCAAAAATCAGCATTTGGATCACTTTCCAATAGCAGTGCTGGGAGCAGTCCAAGGGCAGAAAACAACAAAGAAGGTGCCACCTTGTGCAATGCCTTGTAA 1800 0.4717 MDLGVVGLEGVVGSESCCVFGSSLASDPETKHKWYGSGVLKQERSAIASEDDEWRTSKVAKTDHDMSSASKAMLFQQRNNSLLRSNATLFSDGHHHQSQMLSFSSPKSESLLVDKASSNATLPFSYHQLSSNTRNAGYSSGSISMHGALAGVRGPFTPSQWMELEHQALIYKYITSNVPVPTHLIPIRKALDSLGFCNFSTGLLRPNALGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQLGHALTTTTTTNTPNASSNSTVVPRNTTTTTTFAHNNVHHPLPPHSSQANTINRMFTSNKENNSTSERLQDPALPMLPPTLELKPKENNPFMIHKHHIPADEYSRNSNEFGLVTSDSLLNPTQKRSFTSSQKDDSESQQQHSLRHFIDDSPKPQSHNHHHHHHSSSIWPELDSMQSDRTQLSISIPISSSDFMSFTTSSPSNEKLTLSPLGHSRELDPIQMELGMGSGASNEANTRQANWIPITWESSMGGPLGEVLNLSNNSNASDQCGKNNNTSALNLMKDGWDNNPPLGSSPTGVLQKSAFGSLSNSSAGSSPRAENNKEGATLCNAL* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0787 599 MobiDBLite consensus disorder prediction 405 423 - -
Gso14g0787 599 Pfam WRC 224 266 IPR014977 -
Gso14g0787 599 ProSiteProfiles QLQ domain profile. 155 190 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso14g0787 599 ProSiteProfiles WRC domain profile. 223 267 IPR014977 -
Gso14g0787 599 PANTHER GROWTH-REGULATING FACTOR 9 26 591 - -
Gso14g0787 599 PANTHER - 26 591 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso14g0787 599 SMART QLQ_2 154 190 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso14g0787 599 MobiDBLite consensus disorder prediction 532 599 - -
Gso14g0787 599 MobiDBLite consensus disorder prediction 383 437 - -
Gso14g0787 599 MobiDBLite consensus disorder prediction 532 550 - -
Gso14g0787 599 Pfam QLQ 155 185 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso14g0787 599 MobiDBLite consensus disorder prediction 557 590 - -
Gso14g0787 599 MobiDBLite consensus disorder prediction 273 292 - -
Gso14g0787 599 MobiDBLite consensus disorder prediction 383 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0787 Gso-Chr14 8374962 8379717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0787 41 573 GRF Transcription Factor Family AT2G22840 41.788 4.05e-99 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gso14g0787 WRC 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0787 - - gmx:100807610 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0787 14 8374962 8379717 Gso17g1982 17 39141120 39145576 GST