Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0777 ATGGTGGTGGTTTTGTCGGATCAGGATGAATTCGACGAGGAGCCCGGCGAGGTTGTCGATTCGGCGCCACCGCAGAAGGTCGGCGAAGAGAGACAATTCAGCGGTTTCAAGAAGAAGCTTCTCAAACGCGGACAGGGTTGGGAATTCCCCAACTTCGACGACGTCGTAACTGTTCGCTGTGTTGGAATTGGAACATTGCTCGATGGAACAACGTTTGATTACACTAGGGAGAGGGATCGACCTAGAACGTTTGCTCTGGGCAAAGATGATGTTGCTGCTGGGTTGGACCGTGGGATTTGCACTATGAAGAAAGGGGAGGTGGCATTGTTCACGTTGCCCGGAGATGGTGGTGATGGTGATTTTACGCGTGATTCCGACGGCTCGGTTGTGCGGTTTGAGGTGGAGCTCGTTTCGTGGATCACGGTGGTGGATGTTTGCAAAGATGGTGGAGTTGTCAAGAAGATTATGGAGAAGGGGAGTGGGAACGAGCGCCCCGGTGATCTTGATGAAGTGCTGGTGAAGTATCAGGTGGTGCTTGATGATGGCACTGTTGTTGTGGAGACACCGGAAGGAGGAGTTGAGTTTCACGTGAAGGATGGTCATCTTTTTCCTATATTGCCGAAAGTAATCATGACTATGACAAGGGGAGAGAAGGCTGAATTAATTGTCCAACCACAGTATGCCTTTGGGGAGAAGGGGAGAGAAGCTGGCAGTGGGCTCTGTTCAATTCCTCCGAATTCAGTGCTGCATGTTAATATTGAATTGGTATCCTTCAAACCTGTCATAAATGTTACTGGTGACTCCAAGGTGATTAAAAAGATTTTGAAAGAAGGAGAGGGTGTTTTCACAGCCAATGAGGGTGCAAATGTTACTGTGAGGTTTACAGCTATGCTAGAAGATGGCACTGTATTTGAGAAAAGAGGAATTGGTGAAACACAACCCTTGGAATTCATAACTGATGAGGAACAAGTAATTACTGGTCTAGACCGAGCCGTGGCAACAATGAAGAAGGGTGAGAGAGCGATAGTTAGCATACATCCTGATTATGCATTTGGAAATGTTGAAGTGAGACGAGATCTTGCTATTGTGCCACCAGGCGCGACTGTAGTCTATGACGTTGAGATGATGGATTTTATTAAGGAGAAAGCACCATGGGAATTGAATAGTAAGGAGAAAATTGAGGTGGCTGGGAGGATGAAAGAAGAAGGAAATGTATTATTTAAAGGTGGCAATTATCAGCGAGCAGGGAAGAAATATGAAAAGGCTGCTGATTTTGTTGAAGAAGATGGATCCTTTGGGGATGATGAGCAAAAGCAAGCTCAGACACTGAGAGTGTCATGCTGGTTGAACGGTGCAGCTTGTAGCCTTAAACTTAATGACTTTCCTGGAGCAATCAAGCTATGTTCACAGGTGCTTGATGTTGAATTTTGCAACGTGAAAGCTTTTTACAGACGAGCACAAGCATATATAGAAACTGGAGATTACCTTTTAGCAGATGTAGACATCAAGAAAGCTCTTGTGGTGGACCCACAAAACAGGGAGGTGAAGGTAATCCAGAAGAAATTGAAGCAACTTCAAGCTGACAGTGACAAAAAAGATGCTAAGCTATATGAAAACATGTTTGCACGTAAAACAAAGGACTCGCCCATGGCTATAAAGAGATTGAAGGTTGAAAAAGATGAGAGGGAAAATGAAGAGGTTGCAAGAATGGAAATTGATGAAGTTGCTGATAGCCCAGTGATTCAATAG 1749 0.4511 MVVVLSDQDEFDEEPGEVVDSAPPQKVGEERQFSGFKKKLLKRGQGWEFPNFDDVVTVRCVGIGTLLDGTTFDYTRERDRPRTFALGKDDVAAGLDRGICTMKKGEVALFTLPGDGGDGDFTRDSDGSVVRFEVELVSWITVVDVCKDGGVVKKIMEKGSGNERPGDLDEVLVKYQVVLDDGTVVVETPEGGVEFHVKDGHLFPILPKVIMTMTRGEKAELIVQPQYAFGEKGREAGSGLCSIPPNSVLHVNIELVSFKPVINVTGDSKVIKKILKEGEGVFTANEGANVTVRFTAMLEDGTVFEKRGIGETQPLEFITDEEQVITGLDRAVATMKKGERAIVSIHPDYAFGNVEVRRDLAIVPPGATVVYDVEMMDFIKEKAPWELNSKEKIEVAGRMKEEGNVLFKGGNYQRAGKKYEKAADFVEEDGSFGDDEQKQAQTLRVSCWLNGAACSLKLNDFPGAIKLCSQVLDVEFCNVKAFYRRAQAYIETGDYLLADVDIKKALVVDPQNREVKVIQKKLKQLQADSDKKDAKLYENMFARKTKDSPMAIKRLKVEKDERENEEVARMEIDEVADSPVIQ* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0777 582 Gene3D - 26 142 IPR046357 GO:0003755
Gso14g0777 582 SUPERFAMILY TPR-like 390 541 IPR011990 GO:0005515
Gso14g0777 582 Gene3D - 260 383 IPR046357 GO:0003755
Gso14g0777 582 Gene3D Tetratricopeptide repeat domain 384 539 IPR011990 GO:0005515
Gso14g0777 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 168 259 IPR001179 GO:0003755
Gso14g0777 582 MobiDBLite consensus disorder prediction 1 24 - -
Gso14g0777 582 SUPERFAMILY FKBP-like 4 141 - -
Gso14g0777 582 Gene3D - 143 259 IPR046357 GO:0003755
Gso14g0777 582 ProSiteProfiles TPR repeat profile. 479 512 IPR019734 GO:0005515
Gso14g0777 582 SUPERFAMILY FKBP-like 144 259 - -
Gso14g0777 582 SMART tpr_5 445 478 IPR019734 GO:0005515
Gso14g0777 582 SMART tpr_5 479 512 IPR019734 GO:0005515
Gso14g0777 582 SMART tpr_5 396 429 IPR019734 GO:0005515
Gso14g0777 582 SUPERFAMILY FKBP-like 265 396 - -
Gso14g0777 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 53 140 IPR001179 GO:0003755
Gso14g0777 582 PANTHER PEPTIDYLPROLYL ISOMERASE 261 378 - -
Gso14g0777 582 PANTHER PEPTIDYLPROLYL ISOMERASE 378 563 - -
Gso14g0777 582 PANTHER PEPTIDYLPROLYL ISOMERASE 5 265 - -
Gso14g0777 582 Coils Coil 515 535 - -
Gso14g0777 582 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 265 - -
Gso14g0777 582 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 261 378 - -
Gso14g0777 582 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 378 563 - -
Gso14g0777 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 49 136 IPR001179 GO:0003755
Gso14g0777 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 375 IPR001179 GO:0003755
Gso14g0777 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 164 256 IPR001179 GO:0003755
Gso14g0777 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 287 379 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0777 Gso-Chr14 8191108 8197824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0777 26 543 Calmodulin-binding Proteins AT3G25230 54.302 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0777 K09571 - gmx:100798382 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0777 14 8191108 8197824 Gso17g1993 17 39271956 39278930 GST