Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0776 ATGGCTGAACTCTACAGGCTCAGCTCCGTCGAGTGGAGCCCTTCTCCGGTCATCGCTTTAGCCACCAGCTTCGACGGCTCCCGAGTAGCCGCCGCTCGCAAAGACGGCTCCCTCGAAATCTGGCTCGTCTCTCCCGGCTCCATCGGCTGGCACTGTCAGCTGACTATACACGGAAACCCTAACGGAAGAGTGACGTCGCTTATTTGGTGCCCCGGTGGCCCCGACGGAAGCCGCTTGTTTTCGTCCAACATAGATGGCTCCGTTACTAAGTGGGATCTTTTCCACTTGACGCAGAAGACGGTGCTGCCATCGGACGGTGTCACAATCTGGCAAATGGCAGGGACTTTCCCTAAGGGTGACGAGATCGATGATAAAAGGAAGGGTGAAAGAATGGGGAATGGGTTTCATGGTTTTGATGAACATGAGAGCAGTGAAAGTGATGACGATTCTGATTCACCTGGTTCTCCCGAGCTTTCAGTTGGTGAGTATCCACGCGTGGCGATTGCTCTCGACAATGGATGTGTGAAAATTTATGATATCTCCGACACAGATGAATTTATTCATGTAAAATCTATGCCCCGGGTCAAAGGGCGAGTTTTAAGTGTGACTTGGAGTACAGATTCTAATTACGTATATTCAGGAAGTAGTGATGGGTTGATACGATGCTGGAATGCTACATTGGGCAATGAAATCTATAGGATTACAGCTGGACTTGGAGGGTTGGGCAGTGGACATGAACTTTGCATATGGTCATTGCTGTCTTTAAGGTCTGGTACACTTGTTAGTGCGGACAGCAGTGGTAGTGTCCAGTTTTGGGACAGTCAACATGGAACTCTCTTGCAAGCACATACTTTACACAAGGGACATGTACACGCTCTGGCAGCATCTCCTAGTCATAATAGGGTGTTCTCTGCTGGTTCTGATGGCCAGGTTATTCTTTACAAGCTATCTAGTAGTCAGTCAGCATCATCCGATGATATCAATTCTCCATCAACAATGAAGAGATGGATTTATGTTCACTATGTAAGGGCTCATACACATGACATCAGGGCCCTAGCTGTTGCTGTACCGATAAGTCACGAAGATATTAAGCCAGAAAAGAGGATTAAAAGAGCTCGACGTGCAGAAAATCCCATTAGTTTCCGTTACCATAAGTGGGCTCATTTGGGGGTTCCTATGCTTATCTCAGCTGGAGATGACACAAAACTTTTTGCATACCCAGCGAAAGAATTCACCATGTTTTCTCCTCATGATATCTGTCCTGCGCCTCAGAGAACACCCATTCAACTAGTGCATAATTCTGTCTTTAACCAACGCAAACTGCTTTTAATCCAATCTTCGCAAAAGATAGAGGTTCATTTGCTACAACTAAAAAAGGTCTGCACCTCTGGAGGCTTTACAAAGAACGATGTAGTGGCTGAAGTCAAGAGTAAGGGATCTCGGAAGATAATTTGCAGCACCATTTCTAATTCAGGGGCACTATTTGCGTACTCTGATCATAAAAAGCCTAGTCTTTTTCAATTGAAAAGGAATGAAGTTGGAAAAATCAAATGGGATGTTAGAAAAAGGGAGCTTCCTCAGATATTACCATTTGGCCATTCTATGATTTTTACTCATGACTCCTCCAAGTTGATAGTAGCAGGTCACGATAAAAGGATATATGTTGTGCATGTTGGGGGGGCAGATGAAGTTAAGTCAGAATTACTGCATACTTTTACACCCCTTCGCGAATCACAAGATCAAGAATTACCTCCAACTGAGCCACCCATAACAAGATTGTTTACTAGTTCTGATGGGCAGTGGTTGGCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAACTTGGAGATACTAAGCCAGCACTGGTTCATTTCAAGATTGGATGGCGCCTCTGTTACAGCTGGTGGCTTTCCTCCCCAGAACGACAATGTACTGATAGTTACAACTTCCTCAAATCAAGTGTATGCATTTGACATAGAGGCCAAGCAGTTGGGAGAATGGTCCACAAGACACACACATGCTCTTCCTAGGAGATACCTTGAATTTCCTGGTGAAGTTATTGGGCTCTCATTCCCTCCATCAGAAACTTCATCTTCTCCATCGGCAACTTCATCTTCGGTTGTTGTTTACAGCTCCAGGGCTATGTGCTTGATTGACTTTGGATTGCCCGTGGAGCAAGATGAAAGTGATATGCTAAATACTAAAGATTCAAGGGCAAGGAATTTACAAAATTTTAATGTTAAGAAGAGGATTGAAGTTATGAAGGAACATAATAGGAGGAATTTTGAAGTTATACCTTTCGAGAATCCTGTTTTATTTTTAGGTCATACTGCAAAAAATTCCATCTTTATGGTTGACAAACCGTGGTTGCAAGTGGTTAAGAGTTTAGAAGGCCGACCAGTCCACAGACATATATATGGGACATGA 2430 0.442 MAELYRLSSVEWSPSPVIALATSFDGSRVAAARKDGSLEIWLVSPGSIGWHCQLTIHGNPNGRVTSLIWCPGGPDGSRLFSSNIDGSVTKWDLFHLTQKTVLPSDGVTIWQMAGTFPKGDEIDDKRKGERMGNGFHGFDEHESSESDDDSDSPGSPELSVGEYPRVAIALDNGCVKIYDISDTDEFIHVKSMPRVKGRVLSVTWSTDSNYVYSGSSDGLIRCWNATLGNEIYRITAGLGGLGSGHELCIWSLLSLRSGTLVSADSSGSVQFWDSQHGTLLQAHTLHKGHVHALAASPSHNRVFSAGSDGQVILYKLSSSQSASSDDINSPSTMKRWIYVHYVRAHTHDIRALAVAVPISHEDIKPEKRIKRARRAENPISFRYHKWAHLGVPMLISAGDDTKLFAYPAKEFTMFSPHDICPAPQRTPIQLVHNSVFNQRKLLLIQSSQKIEVHLLQLKKVCTSGGFTKNDVVAEVKSKGSRKIICSTISNSGALFAYSDHKKPSLFQLKRNEVGKIKWDVRKRELPQILPFGHSMIFTHDSSKLIVAGHDKRIYVVHVGGADEVKSELLHTFTPLRESQDQELPPTEPPITRLFTSSDGQWLAAVNCFGDIYVFNLEILSQHWFISRLDGASVTAGGFPPQNDNVLIVTTSSNQVYAFDIEAKQLGEWSTRHTHALPRRYLEFPGEVIGLSFPPSETSSSPSATSSSVVVYSSRAMCLIDFGLPVEQDESDMLNTKDSRARNLQNFNVKKRIEVMKEHNRRNFEVIPFENPVLFLGHTAKNSIFMVDKPWLQVVKSLEGRPVHRHIYGT* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0776 809 Gene3D - 154 406 IPR015943 GO:0005515
Gso14g0776 809 MobiDBLite consensus disorder prediction 118 160 - -
Gso14g0776 809 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 809 - -
Gso14g0776 809 ProSiteProfiles Trp-Asp (WD) repeats profile. 199 233 IPR001680 GO:0005515
Gso14g0776 809 Gene3D - 468 697 IPR015943 GO:0005515
Gso14g0776 809 MobiDBLite consensus disorder prediction 118 143 - -
Gso14g0776 809 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 809 IPR044622 GO:0010073|GO:0035266
Gso14g0776 809 Gene3D - 2 130 IPR015943 GO:0005515
Gso14g0776 809 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 192 224 - -
Gso14g0776 809 Pfam WD domain, G-beta repeat 284 314 IPR001680 GO:0005515
Gso14g0776 809 Pfam WD domain, G-beta repeat 199 224 IPR001680 GO:0005515
Gso14g0776 809 SMART WD40_4 576 615 IPR001680 GO:0005515
Gso14g0776 809 SMART WD40_4 522 557 IPR001680 GO:0005515
Gso14g0776 809 SMART WD40_4 235 273 IPR001680 GO:0005515
Gso14g0776 809 SMART WD40_4 185 224 IPR001680 GO:0005515
Gso14g0776 809 SMART WD40_4 49 92 IPR001680 GO:0005515
Gso14g0776 809 SMART WD40_4 3 42 IPR001680 GO:0005515
Gso14g0776 809 SMART WD40_4 276 315 IPR001680 GO:0005515
Gso14g0776 809 SUPERFAMILY WD40 repeat-like 164 665 IPR036322 GO:0005515
Gso14g0776 809 SUPERFAMILY WD40 repeat-like 15 110 IPR036322 GO:0005515
Gso14g0776 809 ProSiteProfiles Trp-Asp (WD) repeats profile. 283 324 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0776 Gso-Chr14 8177999 8184573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0776 K14548 - gmx:100797494 1585.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0776 14 8177999 8184573 Gso17g1994 17 39282692 39289438 GST