Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0765 ATGTTGTGTGCTTGTTCCGGGGAGCAATTCAAATTTGAAGAGGCGCCACCACGGTCACCAGACTCCTTGGCAACAAGGGATTTCTCTGCAAGTGGCCTTTCTTCAAGGACTGGGGATTGGGAATCCAAATTTGATGAAACACAAGTAGAAGATGTTGAATCTACTTTAAAAGAAGCTCTCTCATTAAACTATGAGGAAGCTCGGGCTTTGTTGGGGAGGCTTGAATATCAAAGAGGGAACTTTGATGCCGCCCTTCAAGTTTTTGAGGGTATAGACATAAGGGCTTTGGCCCCAAGGATGATAAGGGCTATAGCTGAAAGAATCAAACAAAGAAAGCCACGTTCCAAGGTGGATAATGGGCTTCCTAATGTGATGTCAATGCATTCAGTAAGCCTGCTTCTTGAGGCGATTTTGCTTAAATCCAAATCCTTAGAAGAACTTGGGCGATACACTGAGGCTGCAAAGGAGTGCAGAATTGCTGTGGATACAGTTGAATCTGCTCTTCCTAATGGAATGCCTGAGGGTATTGGTGAAGCTTGTAAGTTGCAAGAAATGTTCCACAGAGCATTGGAGTTGCTTCCAAATCTATGGATCAAGGCAGGTTTGCCAGATGAAGCTGTCACTGCTTATCGGCGGGCTCTAGTCAAGCCCTGGAATTTGGAGCCGCGGAGGTTGGCCTGTGTGCAAAAAGATTTAGCTACCACACTACTCTATGGAGGTGTTGAAGTAAACCTGCCCCCTCAGTTGCAAGTGAATGGTCTAACAACACCTATGAGTGGCACTGAAGAGGCTATACTTTTGCTATTAATACTTTCAGGAAAGATGGCACTTCAGGAAATAGATTGGGACCCTGAAATAATGGATAATCTTACATTTTCACTTTCAATTACTGGGATGTTTGAATCATTAGCGGATCATGTAGAGAAGATCCTTCCAGGTGTTTATGATCGAGCCGAGAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCAGGACAGAATGATATAGCCTTGAACCTTTTGAGGAAGGCTTGTGGTAGTTCTGAAGCAAAGCATAGACCCCATTTTCCTTCATTTTTGTTTGGTGCAAAGCTGTATTCTCTAAATCCAAACCATGCTCGTGAAGGAATTAAATTATCACAGGAAGTTATTGATCTAGCCAAACATCAAAATAAGCATTTTTTGGGTCAGGGCCAAAAATTTCTTGGCATTTGCCATGGAGCTGCTGCTAGAACATCTGTACTGGATTCTGAAAGAATTATATTTCAAAGAGAGTCTTTGAAGTTTCTAAGTGATGCTGCCCTAAATGGAAATAATGACCCAGAAGTGATGTTCAGCCTTGGACTGGAAAACGCAATTCAAAGAAATCTAAATGCAGCTTATGACAATATAATGATTTACTCAGACATGATGGCTGGCAGCTCAAGAAGAGGTTGGCAGCTGTTAGCACTCATAGTATCAGCACAGCAGCGGTTTCAGGACGCCAAAACTATAGTTGATTTTGCTTTAGATGAGGCTGGCAGTATAGATCAGTTAGAACTACTGAGACTGAAAGCTGTACTTCAAATTACTCAGCAGCAACCCAAGCAAGCAATTGAGACCTACAGAATCTTGCTAGCTGTAATTGAAGCAAGAAAAGAGCATTGGCTACAAGCTAAGACATTCAGGCATGAGGCATTAACAGAACAGAAGTTGGAAATGGAAGCTTGGCAGGATTTGGCTACCATTTATGCAGATATTAGTTCCTTTCTTGATGCAAAAGCTTGTGTTGACAAGGCCCAGTTGATAGAATTTTTTTCTCCCAGAAGTTGGCATATTACTGGGTTGTTGTTTGAAGCTCAATCTTTGCATAAGGAGGCCTTTGTTTCCTTCTCAGTCTCGTTGTCAATAGAACCGGATTACATTCCCAGTATTATTTCAACAGCAAAATTGTTACTTAAACTTGGAATGCAATCACTTCCAATAGCAAGAAGCTTTTTAATGAATGCTTTGAGATTAGACCCCACAAACCATGATGCATGGTTTAACCTTGGATTGGTTTCAAAAATGGAAGGCTCGTTACAACAAGCGGCAGATTGCTTTCAAGCTGCATATGAGCTGAAGCTTTCAGCTCCAGTGCAAAAATTTGAGTGA 2133 0.4191 MLCACSGEQFKFEEAPPRSPDSLATRDFSASGLSSRTGDWESKFDETQVEDVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFEGIDIRALAPRMIRAIAERIKQRKPRSKVDNGLPNVMSMHSVSLLLEAILLKSKSLEELGRYTEAAKECRIAVDTVESALPNGMPEGIGEACKLQEMFHRALELLPNLWIKAGLPDEAVTAYRRALVKPWNLEPRRLACVQKDLATTLLYGGVEVNLPPQLQVNGLTTPMSGTEEAILLLLILSGKMALQEIDWDPEIMDNLTFSLSITGMFESLADHVEKILPGVYDRAERWYFLALCYSAAGQNDIALNLLRKACGSSEAKHRPHFPSFLFGAKLYSLNPNHAREGIKLSQEVIDLAKHQNKHFLGQGQKFLGICHGAAARTSVLDSERIIFQRESLKFLSDAALNGNNDPEVMFSLGLENAIQRNLNAAYDNIMIYSDMMAGSSRRGWQLLALIVSAQQRFQDAKTIVDFALDEAGSIDQLELLRLKAVLQITQQQPKQAIETYRILLAVIEARKEHWLQAKTFRHEALTEQKLEMEAWQDLATIYADISSFLDAKACVDKAQLIEFFSPRSWHITGLLFEAQSLHKEAFVSFSVSLSIEPDYIPSIISTAKLLLKLGMQSLPIARSFLMNALRLDPTNHDAWFNLGLVSKMEGSLQQAADCFQAAYELKLSAPVQKFE* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0765 710 Coils Coil 57 77 - -
Gso14g0765 710 Gene3D Tetratricopeptide repeat domain 545 652 IPR011990 GO:0005515
Gso14g0765 710 SMART tpr_5 318 351 IPR019734 GO:0005515
Gso14g0765 710 SMART tpr_5 512 545 IPR019734 GO:0005515
Gso14g0765 710 SMART tpr_5 671 704 IPR019734 GO:0005515
Gso14g0765 710 SMART tpr_5 601 634 IPR019734 GO:0005515
Gso14g0765 710 SUPERFAMILY TPR-like 135 347 IPR011990 GO:0005515
Gso14g0765 710 Gene3D Tetratricopeptide repeat domain 653 706 IPR011990 GO:0005515
Gso14g0765 710 MobiDBLite consensus disorder prediction 24 38 - -
Gso14g0765 710 Gene3D Tetratricopeptide repeat domain 24 242 IPR011990 GO:0005515
Gso14g0765 710 SUPERFAMILY TPR-like 559 701 IPR011990 GO:0005515
Gso14g0765 710 Gene3D Tetratricopeptide repeat domain 270 544 IPR011990 GO:0005515
Gso14g0765 710 MobiDBLite consensus disorder prediction 12 39 - -
Gso14g0765 710 SUPERFAMILY TPR-like 425 594 IPR011990 GO:0005515
Gso14g0765 710 ProSiteProfiles TPR repeat profile. 671 704 IPR019734 GO:0005515
Gso14g0765 710 PANTHER PROTEIN NPG1 1 709 IPR043376 -
Gso14g0765 710 PANTHER PROTEIN NPGR1 1 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0765 Gso-Chr14 8085828 8090396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0765 1 709 Calmodulin-binding Proteins AT1G27460 57.924 0.0 833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0765 14 8085828 8090396 Gso17g2002 17 39351534 39356984 GST
Gso14g0765 14 8085828 8090396 Gso4g0399 4 3638692 3642846 PCT
Gso14g0765 14 8085828 8090396 Gso6g0378 6 3519892 3523914 PCT
Gso4g0399 4 3638692 3642846 Gso14g0765 14 8085828 8090396 PCT
Gso6g0378 6 3519892 3523914 Gso14g0765 14 8085828 8090396 PCT