Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00264 ATGCTGAAGATTTGCTGCATTGGGGCTGGATATGTGGGGGGTCCAACAATGGCAGTCATTGCACTGAAATGCCCCTCAATTGAAGTGGCTGTTGTTGACATCTCTAAATCCAGGATTGCAGCATGGAACAGTGACCAGCTCCCTATCTATGAGCCAGGCCTTGATGATGTGGTGAAGCAATGTCGTGGCAAGAACCTTTTCTTCAGCACTGATGTTGAGAAACATGTCTATGAGGCCGACATAGTGTTCGTCTCCGTCAACACCCCGACAAAAACTCGTGGTCTTGGAGCCGGAAAGGCTGCAGATTTGACTTACTGGGAGAGTGCAGCACGCATGATTGCTGATGTCTCCAAGAGTGACAAGATTGTGGTGGAGAAATCCACTGTCCCTGTGAAAACTGCTGAGGCCATAGAGAAGATTTTGACTCACAATGGAAAGGGAATCAAGTTCCAAATCCTTTCAAACCCTGAATTCCTTGCTGAGGGAACTGCAATCCAAGATCTTTTCAACCCGGATCGAGTCCTAATTGGAGGCAGGGAGACCCCAGAAGGCCAAAAAGCAATTCAAACATTGAAAAATGTGTATGCTCATTGGGTTCCTGAGAAGAAAATTCTAACCACAAACCTCTGGTCTGCTGAGCTATCCAAGCTTGCTGCTAATGCCTTTTTGGCACAGAGAATTTCATCTGTGAATGCTATGTCAGCACTTTGTGAGGCCACTGGGGCAAATGTCACACAAGTTTCCTATGCTGTTGGCACAGACACAAGGATTGGACCGAAATTCCTCAATGCTAGTGTTGGTTTTGGTGGATCCTGCTTCCAGAAGGATATCTTGAACCTTGTCTACATCTGTGAATGTAATGGCCTTCCAGAGGTGGCTGAGTACTGGAAACAAGTGATCAAGGTCAATGATTATCAGAAGAGCCGGTTCGTGAACCGCGTGGTTTCGTCAATGTTTAACACTGTTGCAACCAAAAAGATAGCAATTCTTGGGTTTGCATTCAAGAAGGACACTGGTGACACAAGGGAGACACCAGCCATTGATGTGTGCAAGGGACTACTCGGCGACAAGGCGCGCCTAAGCATATATGATCCACAGGTCACTGAGGACCAAATTCAGAGGGATTTATGGATGAACAAGTTTGATTGGGACCACCCTATTCACTTGCAGCCAACTAGTCCTACAACTGAGAAGAAAGTTAGTGTGGTTTGGGATGCTTATGAGGCAACAAAGGATGCAGATGGTGTTTGCATTCTAACTGAGTGGGATGAGTTCAAGAGTCTTGATTATCAGAAGGTGTATGACAACATGAGAAAACCAGCATTTGTTTTTGATGGAAGGAACATTGTGGATGTGGAGAAGCTACGTGAGATTGGTTTCATTGTGTACTCAATTGGCAAGCCATTGGATCCATGGCTCAAGGACATGCCAGCTGTGGCATAA 1443 0.4595 MLKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISKSRIAAWNSDQLPIYEPGLDDVVKQCRGKNLFFSTDVEKHVYEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNGKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQTLKNVYAHWVPEKKILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVTQVSYAVGTDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKVNDYQKSRFVNRVVSSMFNTVATKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLWMNKFDWDHPIHLQPTSPTTEKKVSVVWDAYEATKDADGVCILTEWDEFKSLDYQKVYDNMRKPAFVFDGRNIVDVEKLREIGFIVYSIGKPLDPWLKDMPAVA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00264 480 PIRSF UDPglc_DH_euk 1 480 IPR028356 GO:0003979
Gma19g00264 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 186 IPR001732 GO:0016616|GO:0051287
Gma19g00264 480 Gene3D - 241 477 - -
Gma19g00264 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 451 IPR014027 GO:0016616|GO:0051287
Gma19g00264 480 SMART UDPG_MGDP_dh_C_a_2_a 328 452 IPR014027 GO:0016616|GO:0051287
Gma19g00264 480 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 480 - -
Gma19g00264 480 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 463 IPR036220 -
Gma19g00264 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Gma19g00264 480 Gene3D - 209 240 - -
Gma19g00264 480 Gene3D - 1 208 - -
Gma19g00264 480 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Gma19g00264 480 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 448 IPR017476 GO:0016616
Gma19g00264 480 PIRSF UDPglc_GDPman_dh 2 467 IPR017476 GO:0016616
Gma19g00264 480 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 480 IPR028356 GO:0003979
Gma19g00264 480 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 214 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00264 Gma-Chr19 3574815 3577817 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00264 19 3574815 3577817 Gma05g00220 05 2023721 2025857 ECH
Gma19g00264 19 3574815 3577817 Gma17g00727 17 6155182 6156745 ECH
Gma19g00264 19 3574815 3577817 Gma19g00264 19 3574815 3577817 ECH
Gma02g01052 02 11449474 11451946 Gma19g00264 19 3574815 3577817 ECH
Gma01g00531 01 7632786 7635482 Gma19g00264 19 3574815 3577817 ECH
Gma13g00413 13 16248898 16252143 Gma19g00264 19 3574815 3577817 GST
Gma19g00264 19 3574815 3577817 Gma18g02423 18 58306321 58309184 PCT
Gma19g00264 19 3574815 3577817 Gma08g02229 08 21243943 21246732 PCT
Gma18g02423 18 58306321 58309184 Gma19g00264 19 3574815 3577817 PCT
Gma08g02229 08 21243943 21246732 Gma19g00264 19 3574815 3577817 PCT