Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02238 ATGTTCTTCCACGAAGAAGCTGAAGCGGTTCATTCCTCATACTTCCCGGTTCTTGAAACCATGTTCACTCCAAGTGAAATAGAGGAGCTATTTTCCCTCGTTAACGAACCGGCCAGCCCCGGGTTGGGATCCGGTTCACAAGGTTCGAACCGGGAAGTCCGGTCCATGCACGAGAGAAAGCTTAGGCGAATGCAGTCGAACCGGGAGTCGGCCAGGCGGTCCCGCTGGAGAAAGAAGCGGCATTTGGAGAACCTCACGAACCAACTGAACCGGTTGAGAACGGAAAACCAAGAATACAAAAACCGGTTATTCTTAACCATGCACCAGAATCTTCTACTTTCCGTGCAGAATGAACGTCTTAGATCCGAATCCGTGACCCTTATGGCTAGACTCTCGGATCTTTATCAAAATTTAGGCACCATGATGATTTCACAATAG 438 0.4909 MFFHEEAEAVHSSYFPVLETMFTPSEIEELFSLVNEPASPGLGSGSQGSNREVRSMHERKLRRMQSNRESARRSRWRKKRHLENLTNQLNRLRTENQEYKNRLFLTMHQNLLLSVQNERLRSESVTLMARLSDLYQNLGTMMISQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02238 145 CDD bZIP_plant_GBF1 60 109 IPR045314 GO:0003700|GO:0006355
Gma17g02238 145 Gene3D - 57 108 - -
Gma17g02238 145 Pfam bZIP transcription factor 59 103 IPR004827 GO:0003700|GO:0006355
Gma17g02238 145 Coils Coil 54 102 - -
Gma17g02238 145 SUPERFAMILY Leucine zipper domain 59 113 IPR046347 GO:0003700|GO:0006355
Gma17g02238 145 PANTHER BZIP TRANSCRIPTION FACTOR 26 142 - -
Gma17g02238 145 MobiDBLite consensus disorder prediction 38 77 - -
Gma17g02238 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 142 - -
Gma17g02238 145 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Gma17g02238 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 103 IPR004827 GO:0003700|GO:0006355
Gma17g02238 145 MobiDBLite consensus disorder prediction 52 71 - -
Gma17g02238 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02238 Gma-Chr17 40256523 40256960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02238 12 138 bZIP Transcription Factor Family AT3G49760 37.037 2.14e-19 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma17g02238 bZIP_1 1.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02238 - - gmx:102668006 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02238 17 40256523 40256960 Gma14g00798 14 8315573 8316657 GST
Gma17g02238 17 40256523 40256960 Gma04g00438 04 3882996 3883516 PCT
Gma17g02238 17 40256523 40256960 Gma06g00436 06 3702406 3703087 PCT
Gma04g00438 04 3882996 3883516 Gma17g02238 17 40256523 40256960 PCT
Gma06g00436 06 3702406 3703087 Gma17g02238 17 40256523 40256960 PCT