Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02237 ATGGAGAAGATCTGCGTCGCCGTTCGTCTTCGCCCACTGGTTTCCCAAGACTCTTCTTCTTCCTCCGTCGGAACTTTCTGGAAGGTCGAAGATAACCGCATCTCTCTCCACAAGATCCATGGCACTCCACTCTCTGCTTCTTCTTACGCTTTCGATCACATATTTGACGAAAGAAGCACCAATGCTAGCGTCTACGAGCTTCTCGCCAAGGACATCATTCACGCCGCGCTCGACGGCTTCAACGGAACTGCATTTGCGTATGGGCAGACCAGTAGTGGCAAGACTTTCACCATGAATGGTTCTGAAACTGACGCAGGAGTGATTCCTCGCGCAGTTGGAGACATATTTGCGACAATGGAGATGATGTCTGATCGAGAGTTTCTGATACGAGTTTCCTACATGGAGATCTACAACGAAGAAATTAATGACCTTCTTGTTGTTGAAAATCAGAAATTGCAAATTCATGAGAGCTTGGAGCGTGGAGTATTTGTTGCAGGGCTGAAAGAGGAAATTGTAAATAATGCTGAACAAGTGCTGAATCTCATTAAAGCAGGGGAAGTTAACAGACACTTTGGTGAGACAAATATGAATGTAAGGAGTAGCAGATCGCACACAATATTTAGAATGGTGATTGAAAGCAAAGCAAAGGATTCCAATTCTTCCAATGATTGTTCAATTAATGATGTTGTTAGAGTTTCAGTCTTGAATTTAGTAGATCTAGCTGGTTCTGAAAGGATTGCTAAGACTGGAGCTGATGGAGTACGTTTAAAAGAAGGAAAATATATTAACAAGAGCTTGATGGTTTTGGGGAACGTTATCAACAAACTAAGTGAGGGTTCAAAGCAAAGGGGGCATATCCCGTATCGTGATAGTAAATTAACTCGTATACTCCAACCTGCTCTTGGTGGTAATGCCAAAACGTCCATTATTTGCACCATAGCACCAGAAGAGATTCACATTGAAGAAACAAGGGGAACTCTTCAGTTTGCTAGCAGAGCCAAGCGCATCACAAATTGTGTTCAAGTGAATGAGATATTGACGGAAGCAGCCTTGTTAAAACGGCAACAATTAGAGATAGAGGAGCTACGTAAGAAGCTTCAGGGATCCCATGCTGAGGTGCTCGAGCAAGAGATTCTTAAACTCAGGAACGATTTGCTCAAGTATGAAATGGAGCGTGGGAAGCTTGAAATGGAACTGCAAGAAGAGAGGAAATCACGTGATCAATGGATTAGGGAGCAACGGATGAAAATTGAAAATTCTTGCACTACTAAATCTTTCTCAGATTGTGGGACGAATGACAATCAGGGATCGGGATGTTTTAGGCGCGGATTTGTGGAAGAGTACAGTGACATTAGTAGTAGTATATCTCAAGGAGATATTTTCAAATCTCCTAAGGTAGATCCCAATGCTTTTGTAGCCAGGCGATCAAAGAATTCAACATTGCCAGATCACAGCCCCCTTCCAGATGCTTTCTGTAATGTGGCTGATGAAGATATGTGGGTGAAAATGAACAATGGTTATATTGCGGACCTTGATTCCCTTCAAACTACTCCTCCCACCAACCGAAAAGTTCAGTCATTCCCGACAAGTGATGCAACTGTTGGTTGTACAAGTGAAATTGAGAAGTATGAACGAGAGGTTCAAGATTTGAGGAAACAACTGGAACTAGCTAAAGAAAGAATAAATGAACTCGAGCAAAAGCATTCAGAAGAAGTGCCATCAAGCAAGCAATTAATCGTTGAGACACCCAAACATCAACAAGAAACACGACTAACTCATGAATTACCTCTGAGGTTATCTGAATCTGAGGGAAACTTCAAAGATAGCTTTGAGGAGGCTTTGTCAGTAATGCAGAGATTTGCATCGGGTGGCACATTATCAACTGCGAAGATACTTTCAACCATGAGTGAAATTGGAGATCATCTATTTGCAACTTTGGAAGGTCATTTTGCTGTGAATACGGGTGGTGAAAGGTCTTCCACCGGAAACAGTGCTCTAATCAATGAACACCAAAAAGAGTTTCGTCAGAGGATTGATAACATAATTACATCGTTGGAGTTATCCGAAACCTCAATAACAGGACAGGAGTGGAAACATAAGTGCAGCTGTGAACCCAAGGGCTCTGATTTGGGAGGTGAAACTGCAAAGGATGATTTAAATGAAAGATATGAAAACCTAGAAAGGGAGTTACTACTGTTGAAGGTCGAAAGAGACTCTTTGCTGCAGAAGTTCTCTGAATCATCAGAGAAGCTATCAATGGTTTCCAGCCAAAAGGAAAATGCTTTGAAAGAGTTAAATACTGAAGTGCTGAGAAGGAAAAATATAGAAGGGGAAGTTAAGCAGATTGCTGCAGCTTTTACTAATCGTCAGAAATCACTCATTTCCTTTCATAGTGATCTTAAGACCAAAATTGAGAATTGGAGAGCCCAGACTACAATCTTGGTGCCCAAATCTTTTGGTTTTAAGGACTAG 2472 0.4175 MEKICVAVRLRPLVSQDSSSSSVGTFWKVEDNRISLHKIHGTPLSASSYAFDHIFDERSTNASVYELLAKDIIHAALDGFNGTAFAYGQTSSGKTFTMNGSETDAGVIPRAVGDIFATMEMMSDREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLERGVFVAGLKEEIVNNAEQVLNLIKAGEVNRHFGETNMNVRSSRSHTIFRMVIESKAKDSNSSNDCSINDVVRVSVLNLVDLAGSERIAKTGADGVRLKEGKYINKSLMVLGNVINKLSEGSKQRGHIPYRDSKLTRILQPALGGNAKTSIICTIAPEEIHIEETRGTLQFASRAKRITNCVQVNEILTEAALLKRQQLEIEELRKKLQGSHAEVLEQEILKLRNDLLKYEMERGKLEMELQEERKSRDQWIREQRMKIENSCTTKSFSDCGTNDNQGSGCFRRGFVEEYSDISSSISQGDIFKSPKVDPNAFVARRSKNSTLPDHSPLPDAFCNVADEDMWVKMNNGYIADLDSLQTTPPTNRKVQSFPTSDATVGCTSEIEKYEREVQDLRKQLELAKERINELEQKHSEEVPSSKQLIVETPKHQQETRLTHELPLRLSESEGNFKDSFEEALSVMQRFASGGTLSTAKILSTMSEIGDHLFATLEGHFAVNTGGERSSTGNSALINEHQKEFRQRIDNIITSLELSETSITGQEWKHKCSCEPKGSDLGGETAKDDLNERYENLERELLLLKVERDSLLQKFSESSEKLSMVSSQKENALKELNTEVLRRKNIEGEVKQIAAAFTNRQKSLISFHSDLKTKIENWRAQTTILVPKSFGFKD 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02237 823 Gene3D Kinesin motor domain 1 368 IPR036961 -
Gma17g02237 823 Coils Coil 716 743 - -
Gma17g02237 823 CDD KISc_CENP_E 3 336 - -
Gma17g02237 823 Coils Coil 533 571 - -
Gma17g02237 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 368 IPR027417 -
Gma17g02237 823 PANTHER CENTROMERE PROTEIN E 2 420 - -
Gma17g02237 823 PANTHER CENTROMERE PROTEIN E 2 420 - -
Gma17g02237 823 Coils Coil 345 412 - -
Gma17g02237 823 ProSitePatterns Kinesin motor domain signature. 233 244 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma17g02237 823 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02237 823 PRINTS Kinesin heavy chain signature 194 211 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02237 823 PRINTS Kinesin heavy chain signature 234 252 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02237 823 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02237 823 SMART kinesin_4 1 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02237 823 ProSiteProfiles Kinesin motor domain profile. 3 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02237 823 Pfam Kinesin motor domain 9 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02237 Gma-Chr17 40236372 40243196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02237 2 398 Miscellaneous Gene Families AT4G39050 44.888 9.08e-94 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02237 K11498 - gmx:100775563 1548.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02237 17 40236372 40243196 Gma17g02237 17 40236372 40243196 ECH
Gma17g02237 17 40236372 40243196 Gma14g00800 14 8333403 8340418 GST