Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02230 ATGAAGTCCATGAATGATAGTAACACCGTTGATGATGGGAACAATCATAATAACTGGTTGGGATTCTCTCTCTCACCCCACATGAAAATGGATGTTGTTACTTCTTCTACTACCACTGGTCCTCATCATCCCCACCAACACCATCATCATCATCACTACTATCATCACCCTCACGAGGCTTCTGCTGCAGCTTGCAACAACAACAACAACACTGTTCCCACTAACTTCTATATGTCACCCTCGCACCTCAACACCTCTGGAATATGTTATGGTGTTGGAGAAAACAGTGCCTTTCACACTCCTTTGGCCATGATGCCTCTCAAGTCAGATGGGTCACTTTGCATTATGGAGGCTCTAACAAGATCACAAACCCAAATGATGGTGCCAACTTCATCTCCAAAACTTGAGGACTTCCTAGGTGGTGCAACTATGGGGGCTCAAGACTATGGAACCCATGAGAGAGAAGCAATGGCTCTAAGCCTAGACAGTATCTACTACAGCAACCAGAATGCTGAACCTGAAACCAACAGGGACCATTCATCTTCTCTTGACCTTCTTTCTGACCATTTCAGGCACCAAACCCATCATCACCCATATTACTCAGGACTTGGGATTTACCAAGTGGAGGAAGAAGAAACCAAGGAACAACCACACGTTGCAGTTTGCAGCTCCCAAATGCCTCAAGTGGTTGAAGGCAGCATTGCTTGCTTCAAAAACTGGGTGCCAACAAGGGAATACTCTTCTTCTTCCACTCAGCAGAATCTGGAGCAGCATCAAGTGAATAGTAGTAGCAGTGGTGGCCTTGGAGAGGATAATAATGTAGCTTATGGGAATGTTGGTGTTGGTAGTAGTGTTGGTTGTGGTGAGTTACAGTCTTTGAGTTTGTCTATGAGTCCTGGTTCTCAATCAAGCTGTGTCACTGTTCCAACTCAGATCTCATCTTCTGGAACTGACTCAGTTGCTGTGGATGCCAAAAAGAGAGGCTCTTCTAAGCTTGGACAGAAGCAACCTGTGCATAGGAAATCCATCGACACATTTGGTCAAAGAACTTCTCAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGATATGAAGCACATTTGTGGGATAACAGTTGCAAGAAGGAAGGGCAAACAAGGAAAGGACGACAAGGTGGTTATGATATGGAAGAGAAAGCTGCAAGGGCTTATGATCTTGCGGCTCTCAAGTATTGGGGACCTTCAACACACATAAACTTCCCGCTAGAAAATTACCAAACTCAACTTGAAGAAATGAAGAATATGAGTAGGCAGGAATACGTGGCCCACTTGAGAAGAAAGAGTAGTGGGTTTTCAAGGGGTGCCTCAATGTACAGAGGAGTGACAAGGCACCACCAACATGGCAGGTGGCAAGCAAGGATAGGCAGAGTTGCAGGAAATAAGGACCTTTATCTTGGGACATTCAGCACTCAAGAGGAAGCAGCTGAAGCATATGATGTAGCTGCAATCAAATTTCGTGGGGTGAATGCTGTCACCAACTTTGACATATCAAGATACGACGTTGAGAGAATAATGGCCAGCAACACCCTTCTAGCTGGAGAGCTAGCTAGAAGAAACAAGAACAGTGAGCCAAGAACCGAGGCCATAGAGTACAATGTTGTGTCAAGCCAACAAGTCATAAGCAACAGGGAAGAAGTTCACGAGACTGTGAACAACAACAACAATAATAATAGTGAAAATGGTTCATCATCAGATTGGAAGATGAGTTTGTATCATCATCAGCAACAGTCAAACAACTGTGACCAGAAAACCATCAAGTGTGAAAATTATAATAGAGGTGGTGCTGCTTTCTCTGTGTCCCTACAAGATCTCATTGGGATTGACTCAGTAGGATCTAGCCAAGGCATGATGGATGAGTCTACTAAGATAGGGACTCATTTTTCAAACCCTTCCTCGCTGGTCACCAGTTTAAGCAGCTCAAGGGAAGGTAGCCCTGATAAAATGGGCCCCACTTTGCTCATTCCAAAGCCTCCAATGGGGTCAAAGATTGTTACTAGCCCTACTGTTGCCAATGGTGTCACTGTTGGCTCTTGGTTTCCCTCTCAAATGAGGCCAGTCTCAATGTCTCACTTGCCAGTTTTTGCTGCTTGGAGTGATGCCTAG 2145 0.4494 MKSMNDSNTVDDGNNHNNWLGFSLSPHMKMDVVTSSTTTGPHHPHQHHHHHHYYHHPHEASAAACNNNNNTVPTNFYMSPSHLNTSGICYGVGENSAFHTPLAMMPLKSDGSLCIMEALTRSQTQMMVPTSSPKLEDFLGGATMGAQDYGTHEREAMALSLDSIYYSNQNAEPETNRDHSSSLDLLSDHFRHQTHHHPYYSGLGIYQVEEEETKEQPHVAVCSSQMPQVVEGSIACFKNWVPTREYSSSSTQQNLEQHQVNSSSSGGLGEDNNVAYGNVGVGSSVGCGELQSLSLSMSPGSQSSCVTVPTQISSSGTDSVAVDAKKRGSSKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTQLEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKNSEPRTEAIEYNVVSSQQVISNREEVHETVNNNNNNNSENGSSSDWKMSLYHHQQQSNNCDQKTIKCENYNRGGAAFSVSLQDLIGIDSVGSSQGMMDESTKIGTHFSNPSSLVTSLSSSREGSPDKMGPTLLIPKPPMGSKIVTSPTVANGVTVGSWFPSQMRPVSMSHLPVFAAWSDA 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02230 714 SUPERFAMILY DNA-binding domain 351 417 IPR016177 GO:0003677
Gma17g02230 714 MobiDBLite consensus disorder prediction 248 268 - -
Gma17g02230 714 Gene3D AP2/ERF domain 451 511 IPR036955 GO:0003700|GO:0006355
Gma17g02230 714 Gene3D AP2/ERF domain 351 417 IPR036955 GO:0003700|GO:0006355
Gma17g02230 714 SUPERFAMILY DNA-binding domain 450 511 IPR016177 GO:0003677
Gma17g02230 714 ProSiteProfiles AP2/ERF domain profile. 352 415 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 CDD AP2 351 415 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 Pfam AP2 domain 352 407 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 Pfam AP2 domain 452 501 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 MobiDBLite consensus disorder prediction 34 55 - -
Gma17g02230 714 SMART rav1_2 451 515 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 SMART rav1_2 352 421 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 PRINTS Ethylene responsive element binding protein signature 353 364 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 PRINTS Ethylene responsive element binding protein signature 491 511 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 ProSiteProfiles AP2/ERF domain profile. 451 509 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 712 - -
Gma17g02230 714 CDD AP2 450 511 IPR001471 GO:0003700|GO:0006355
Gma17g02230 714 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 15 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02230 Gma-Chr17 40107426 40111319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02230 84 536 AP2-EREBP Transcription Factor Family AT4G37750 53.878 7.19e-154 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Gma17g02230 AP2 5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02230 K09285 - gmx:100798179 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02230 17 40107426 40111319 Gma17g02230 17 40107426 40111319 ECH
Gma17g02230 17 40107426 40111319 Gma14g00807 14 8500654 8504925 GST
Gma17g02230 17 40107426 40111319 Gma04g00443 04 3932578 3935871 PCT
Gma17g02230 17 40107426 40111319 Gma06g00440 06 3751765 3754975 PCT
Gma04g00443 04 3932578 3935871 Gma17g02230 17 40107426 40111319 PCT
Gma06g00440 06 3751765 3754975 Gma17g02230 17 40107426 40111319 PCT