Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02225 ATGGATATTGCTGCTCTTTTAACTTCTGCTGGAATTAATATTGCTGTGTGTGTGGTTCTCTTTTCATTTTATTCTGTATTAAGAAAACAACCCAGTAATGTTAATGTGTACTTTGGGAGGAGACTAGCCTCTCAGCATTCAAGACGCATTGATCTCTGCTTGGAAAGATTTGTTCCCTCCCCTAGCTGGATATTGAAAGCATGGGAAACATCTGAGGATGAGATATTGGCTATTGGTGGCTTGGATGCTGTGGTTTTTGTGAGGATACTTGTTTTCAGTATTCGAGTGTTTTCCATTGCTGCTGTCATATGCACTATTCTGGTGCTTCCTGTAAATTACCATGGAATGGACAGAATGTATAAGAATATACCTTTGGAGTCGCTGGAAGTATTTACCATTGAGAATGTCAAAGAAGGATCAAAGTGGTATGAGCTTTGGGCTCATTGTCTTGCACTATACATCATAACATTATCGGCTTGTGCTCTTCTTTACTTTGAATATAAGAGTATTACTAATTTGAGGCTACTACATATTATTGGATCACCTCCAAATCCAAGCCATTTTACAATTCTTGTCCGATCAATTCCCTGGTCTTCAGAAGAATCTTACTGTGAAACTGTGAAAAAATTCTTCTCATATTACCATGCATCAACATATTTGTCGCACCAAATGGTTTATAAGTCCGGTAAAGTTCAAAAACTGAAGGATGATGCTGAACATATGTGTAAGGTAATTAGAGATGCTTCAATGGAAAGGACTTGTAAGCCTAGTTTTATGCAATGTTGCTGTTCTGGAGCACCAACAATTTCTTTTAAGAAGATTTCTACTGAAATGGGTAGTACGCATGGGAGAACTTGCAACACTGACTTGCATTTAGATACAGGAAAAAAGGAATGTTCCTCTGCTTTTGTGTTCTTTAAAAGTCGGTATGCTGCTCTTACGGCTGCACAGGTACTGCAGACATCAAATCCTATGTTATGGGTGACAGATGTAGCTCCTGAACCACATGATGTTTATTGGTCCAATATTTGCATACCATATAGGCAACTTTGGATCCGAAGGATAGCTACACTTGCGGCCTCGGTTGCCTTCATGCTTGTGTTCCTTATCCCTGTTACATTTGTACAAGGCTTGACTCAACTAGAAAAACTTCAGAAAATGTTCCCTTTTCTGACAGGGATACTTAAAGAGAAATTTGTGAATCAGGTGGTGACTGGTTACCTGCCAAGTGTGATATTGGTTTTATTTTTGTGCGCAGTTCCACCCGTGATGATATTATTTTCTGCTGTGGAGGGTTCTATTTCCCGCAGTGCAAGGAAGAAGAGTGCATGTTTTAAAGTCTTGTACTTCACAATCTGGAACGTGTTTTTTGTTAATGTATTTACTGGTTCTGTTATCAGTCAGCTCTCAGTCTTTTCTAGCGTAACAGATCTGCCTGCCCAACTTGCCAAGGCAGTGCCAGCACAGGCTACTTTCTTCACAACTTACATTTTATCATCTGGCTGGGCAAGTTTGGCAGTTGAAGTTATGCAAATTTTCCCTCTACTACGCAATCTTTTCCAGAGATTCATACTCAGGCTTAAAGAAGATGCACTGGATGGCAGCCTATCTTTTCCGTACCATACAGAAGTTCCAAGAATCTTACTGTTTGGATTCCTCGGGTTCACTTGTGCTATTCTGGCACCCCTAATGTTGCCCTTCTTGTTGGTCTACTTTTTCATTGCTTACCTTGTTTATCGAAACCAGATTATCAACGTATACATTACAAAATACGATAGTGGGGGACAGTTCTGGCCCATTGTTCACAACACAACGGTTTTTTCGTTGCTATTTTCTCAACTTATCGCACTAGGGGTGTTTGGACTCAAACGCTCATCAGTTGCATCTGGATTCACCATTCCTCTGCTGATTGGTACGCTTCTATTTCACCAGTATTGTAGGCAACGGTTTCTCCCAGTATTTAGGAGCAATTCAGCACAGATTCTTATTGACTTGGATCGGAGAGATGGGCACAGTGGAAGGATGGAAGAAATTTATGAACATTTGCGTTCAGCCTACAACCAGTCCAGTTTAATGCCACATACCACAAGCCAACCCGAATGTGTCAGTCTTCACGAGGACAAGGATAGTGGTCCATCTTCATCAGAAGATATGGAGACAGGCAATGAAAATGAAATTAGTCAAAAAGATAGACCACGGCCCATTCAACGCACATTGATTTTTCCATCCTCTGTGGAAACTCACTTCTGGAAGCATTGCCTTGGATATGggtccaaaaatacaagagaaatctggaagatttatctgAGGTGTGGAGTTTTCAGCTTTATGGTAGAAGGGGATTTGTTTCAAGTTAATGATATAATGTGGAGAGATTTTCGTAAGCTTTTGTGGAGGGATGTGGGGTTATCATTTATCAAATTTGATTTGTGTATTCGTAGTCTTCCAAGGGTACTGGTGCACGGTGTGGATGCAGGATTGCAACTCTTTTCTTTTCTGTAG 2502 0.3993 MDIAALLTSAGINIAVCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRIDLCLERFVPSPSWILKAWETSEDEILAIGGLDAVVFVRILVFSIRVFSIAAVICTILVLPVNYHGMDRMYKNIPLESLEVFTIENVKEGSKWYELWAHCLALYIITLSACALLYFEYKSITNLRLLHIIGSPPNPSHFTILVRSIPWSSEESYCETVKKFFSYYHASTYLSHQMVYKSGKVQKLKDDAEHMCKVIRDASMERTCKPSFMQCCCSGAPTISFKKISTEMGSTHGRTCNTDLHLDTGKKECSSAFVFFKSRYAALTAAQVLQTSNPMLWVTDVAPEPHDVYWSNICIPYRQLWIRRIATLAASVAFMLVFLIPVTFVQGLTQLEKLQKMFPFLTGILKEKFVNQVVTGYLPSVILVLFLCAVPPVMILFSAVEGSISRSARKKSACFKVLYFTIWNVFFVNVFTGSVISQLSVFSSVTDLPAQLAKAVPAQATFFTTYILSSGWASLAVEVMQIFPLLRNLFQRFILRLKEDALDGSLSFPYHTEVPRILLFGFLGFTCAILAPLMLPFLLVYFFIAYLVYRNQIINVYITKYDSGGQFWPIVHNTTVFSLLFSQLIALGVFGLKRSSVASGFTIPLLIGTLLFHQYCRQRFLPVFRSNSAQILIDLDRRDGHSGRMEEIYEHLRSAYNQSSLMPHTTSQPECVSLHEDKDSGPSSSEDMETGNENEISQKDRPRPIQRTLIFPSSVETHFWKHCLGYGSKNTREIWKIYLRCGVFSFMVEGDLFQVNDIMWRDFRKLLWRDVGLSFIKFDLCIRSLPRVLVHGVDAGLQLFSFL 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02225 833 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 740 - -
Gma17g02225 833 Pfam Late exocytosis, associated with Golgi transport 6 166 IPR032880 -
Gma17g02225 833 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 740 IPR045122 GO:0005227
Gma17g02225 833 Pfam Calcium-dependent channel, 7TM region, putative phosphate 353 620 IPR003864 GO:0016020
Gma17g02225 833 MobiDBLite consensus disorder prediction 691 730 - -
Gma17g02225 833 Pfam Cytosolic domain of 10TM putative phosphate transporter 187 342 IPR027815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02225 Gma-Chr17 40023802 40031616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02225 K21989 - gmx:100796574 1470.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02225 17 40023802 40031616 Gma17g02225 17 40023802 40031616 ECH
Gma17g02225 17 40023802 40031616 Gma14g00821 14 8688729 8701711 GST
Gma17g02225 17 40023802 40031616 Gma04g00449 04 4013503 4022726 PCT
Gma04g00449 04 4013503 4022726 Gma17g02225 17 40023802 40031616 PCT