Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02215 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTGCTCAAGGTTCCGGAAATCGAACAGAAGGTGCTGGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTACTGTGCTGGCAGAGATTTCACAGGCTACCAAAAAATTTACTGAATGCCAAATGATCATGAATGTCCTTTGGACAAGACTGGGTGAAACTGGAAAAGATTGGCGTTATGTATACAAGGCATTAGCTGTTATAGAATATTTGGTAGCACATGGATCTGAACGTGCGGTTGATGACATTATAGAACATACTTTTCAGATATCTGCACTTTCTAGTTTTGAATATGTCGAACCTAGTGGTAAGGATGTGGGACTCAATGTAAGGAAGAAGGCTGAAAACATTGTGTCGCTTTTGAATGATAAAGATAAGATACATGAAGTCAGAAATAAAGCTGCTGCAAACCGTGACAAGTACATTGGAGTTTCTTCTAGTGGGATCACATACAAGTCTGGGTCAGCCTCCTCTTATGGTAGTGGCAGCAGCTTTCAGAGCAGTGGTAAATATGGAGGCTTTGGATCTAGAGATGGCGACAGGTTTAATGATAGCTATAGAGACAAAGGATCCTATGAAGAAGAAAAAGATTACCAAGGAAAATCACACCATGCCACCGCAGGTGACAATCAAGAGAATTCCTTCAAGAAGGGTTCTGCTCGCTCTGCCAGCAAAAGTCAGGAGAACAAGTCATCTAGAGTATCAAAGTCATCTACTAATGCAAATAATTATGGTTCAGTTCCTTCTCAAAGTTCAAGTGTACCTGCAAACAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAAAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAATCGGTGACCTCATGGATGCTCCAACATCTGTTCCTGTAGAAAAGGCAGCAACTAGTAATGTGCCAGAGGTTGATCTTTTTGCAGATGCATCATTTGTATCAGCAGAACCTCATCTGGATAAAGGAGCCATTTCTCAACCACAGGCTGAGGTTGATCTATTTTCTTCACAACCAGCCATTCCTGCAGTTACACCTACAGTTGACTTGTTTTCCATTCCTGAACTGGCAGTGCAGCCAAACAACAAGTCGGAGAAGTCTGTTCCTATGAATAACAGCTCTATCGATCCCTTTGCTGCTGTTCCTCTTAATAATTTTGATGGATCTGATATTTTTGGTGATTTTACTTCTCAATCTGATTCTGTGTCTTCACAGCCCTCCAATAATGTTGTCAGTGATGGCAAGCATGATAATGTGACTGGTAAATCTTTAGCAGACTCTAAAGTTTCCCCTAAAAAGGATGCTTTTCAGGTGAAGTCTGGCGTCTGGGCTGATTCACTAAGCCGTGGACTGATTGATCTCAATATAACTGCTCCTAAAAAAGTATCCCTTGTGGATGTTGGAATTGTGGGTGGATTGAGTGATGGATCCGATGAAAGGGAGAAAGGCCCTCCACCTTCATTTTACATGGGGAGAGCTATGGGTTCAGGATCTGGTCTTGGAATGGGTAGGTCTGGATTCACTCCTTCACAGCCAATAGCTGGAGACGACTTTTTCTCAAACCTTGGAAACCAACAACATCAATTTGGTGGGTTCCAAAAGTAA 1695 0.4212 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTVLAEISQATKKFTECQMIMNVLWTRLGETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVSLLNDKDKIHEVRNKAAANRDKYIGVSSSGITYKSGSASSYGSGSSFQSSGKYGGFGSRDGDRFNDSYRDKGSYEEEKDYQGKSHHATAGDNQENSFKKGSARSASKSQENKSSRVSKSSTNANNYGSVPSQSSSVPANSTEDDMDDFDPRGTSTKTSAGNSNQVDLFGQDLIGDLMDAPTSVPVEKAATSNVPEVDLFADASFVSAEPHLDKGAISQPQAEVDLFSSQPAIPAVTPTVDLFSIPELAVQPNNKSEKSVPMNNSSIDPFAAVPLNNFDGSDIFGDFTSQSDSVSSQPSNNVVSDGKHDNVTGKSLADSKVSPKKDAFQVKSGVWADSLSRGLIDLNITAPKKVSLVDVGIVGGLSDGSDEREKGPPPSFYMGRAMGSGSGLGMGRSGFTPSQPIAGDDFFSNLGNQQHQFGGFQK 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02215 564 MobiDBLite consensus disorder prediction 503 554 - -
Gma17g02215 564 MobiDBLite consensus disorder prediction 427 446 - -
Gma17g02215 564 MobiDBLite consensus disorder prediction 201 224 - -
Gma17g02215 564 Gene3D - 24 164 IPR008942 -
Gma17g02215 564 MobiDBLite consensus disorder prediction 225 280 - -
Gma17g02215 564 MobiDBLite consensus disorder prediction 174 192 - -
Gma17g02215 564 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Gma17g02215 564 Pfam ENTH domain 27 147 IPR013809 -
Gma17g02215 564 SMART enth_2 26 152 IPR013809 -
Gma17g02215 564 MobiDBLite consensus disorder prediction 427 457 - -
Gma17g02215 564 CDD ENTH 28 144 - -
Gma17g02215 564 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 555 IPR033521 GO:0006623|GO:0030276
Gma17g02215 564 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Gma17g02215 564 PANTHER EPSIN/ENT-RELATED 1 555 - -
Gma17g02215 564 MobiDBLite consensus disorder prediction 174 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02215 Gma-Chr17 39863058 39872788 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02215 K12471 - gmx:100789110 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02215 17 39863058 39872788 Gma17g02215 17 39863058 39872788 ECH
Gma17g02215 17 39863058 39872788 Gma14g00833 14 8911721 8918472 GST