Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02212 ATGGGATCCACAATCTTCATTCTCTTGGGGCTGGTAGTTACAGTTTACGGTTTTGTGGACTATGGTAGTAGCTCTTTGTCAAGACTCAAGGTTTTGGAAGTTGAGAGAAAATTAAAGCAGCTTAGAGGACATTCCTTAAAAACTATCCAGAGTGAAGATGGGGATATCATTGATTGCATTGACATTAATAAGCAACCAGCTTTTGATCATCCTGCATTGAAAGGTCACAAAATCCAGATGGCTCCCACTTATAATTCAGCTAAGAAGGACATGACAATAGGGACCAAAACTACTAGAACTAGAAAAAATGCAAAGAGTGGCAAAATGATGAAGCAAAGGGATGAAGGGTCATCTGTGACTGTGACTTCCCAAGTGTGGCAGAAAAGTGGAAGATGTCCAGAGGGAACAATACCTGTTCGAAGAATACAAGAAAGAGACATGATAAAGGCTCATTCAATTGAAGATTATGGAAGGAAGAAGCCAAGCTTCTCTCATCAACATGTTGGTCAACTGAATAATAATCTCGACTCCTTTGTACAACTGAAAAACCACTCTAAAGCAATAGCATTGGCAGTTGGGTTCCGTTACTTGGGAGCCAAAGGAGACATCAAAGTGGACAACCCTTCTGTTGAAAAGGATGATGAATACAGCACTTCCCAAGTATCTCTCTTAACAGGGCCATACAATGACTTTGAGTGTGTTGAAGCTGGTTGGGCGGTCAATCCCAGTGTGTATGGAGATAGGCAAACTCGGTTATTTGTTTACTGGACGGCTGATGCTTCAAAGAAAACGGGTTGCTTTGATCTGACTTGTCCTGGATTTGTTCAGATTAGCAATGAAATTGCTTTAGGTGCTGCAATTTATCCGATATCAATTCCTGGTGGGCTTCAATACATAATAACTATTTACATCTATAAGGATCCCTATACCAATAATTGGTGGGTGCAATATGGTGAGAATACCAACATAGGTTATTGGCCACCTGAGTTATTTGAAACAATACGTTACAATGCAGAATCTGTGGAGTGGGGTGGTGAAGTTTACAGTTCCACTATTGGGCATACTCCTCACACTGCAACACAAATGGGTAATGGACAATTTGCTTCAGTTTTTGGTGAGTCGTCTACAATAACAAGAATGAGAATTCATGACAACTCTGCAGCCTTGAAGATCCCAGAATATGTTGCTGAATTCACGGATGAATTTAACTGCTATGATGTTTGGTATTTGTCAGATTATGTTGAAGATCCTGAGTTATATTACGGAGGGCCTGGTCAAAATCCAAAATGCCCTTAA 1296 0.4035 MGSTIFILLGLVVTVYGFVDYGSSSLSRLKVLEVERKLKQLRGHSLKTIQSEDGDIIDCIDINKQPAFDHPALKGHKIQMAPTYNSAKKDMTIGTKTTRTRKNAKSGKMMKQRDEGSSVTVTSQVWQKSGRCPEGTIPVRRIQERDMIKAHSIEDYGRKKPSFSHQHVGQLNNNLDSFVQLKNHSKAIALAVGFRYLGAKGDIKVDNPSVEKDDEYSTSQVSLLTGPYNDFECVEAGWAVNPSVYGDRQTRLFVYWTADASKKTGCFDLTCPGFVQISNEIALGAAIYPISIPGGLQYIITIYIYKDPYTNNWWVQYGENTNIGYWPPELFETIRYNAESVEWGGEVYSSTIGHTPHTATQMGNGQFASVFGESSTITRMRIHDNSAALKIPEYVAEFTDEFNCYDVWYLSDYVEDPELYYGGPGQNPKCP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02212 431 Pfam Neprosin 214 424 IPR004314 -
Gma17g02212 431 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 45 429 - -
Gma17g02212 431 Pfam Neprosin activation peptide 48 168 IPR025521 -
Gma17g02212 431 MobiDBLite consensus disorder prediction 98 133 - -
Gma17g02212 431 PANTHER CARBOXYL-TERMINAL PEPTIDASE 45 429 - -
Gma17g02212 431 Gene3D - 200 322 - -
Gma17g02212 431 MobiDBLite consensus disorder prediction 113 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02212 Gma-Chr17 39840727 39844534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02212 - - gmx:100816380 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02212 17 39840727 39844534 Gma17g02212 17 39840727 39844534 ECH
Gma17g02212 17 39840727 39844534 Gma14g00836 14 8958084 8961782 GST
Gma17g02212 17 39840727 39844534 Gma06g00452 06 3896100 3899238 PCT
Gma06g00452 06 3896100 3899238 Gma17g02212 17 39840727 39844534 PCT