Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00727 ATGGTGAAGATATGTGGAATTGGAGCCGGGTACGTAGGGGGTCCAACAATGGCTGTGATTGCCCTCAAATGCCCCTCAATTGAAGTGGCTGTGGTTGACATCTCTCACTCTCGCATATCAGCTTGGAACAGCAACAAACTCCCCATTTACGAGCCCGGCCTAGAACAAGTGGTGAATCAGTGCAGAGGAAAGAACCTCCTCTTCAGCACCGATGTGGAAAAGCATGTGCATGAGGCAGACATAGTCTTTCTCTCAGTGAACACCCCAACAAAAACCAGAGGGCTTGGAGCCGGCAAGGCCGCGGACTTGACCTATTGGGAGAGTGCAGCTAGGATGATAGCTGATGTTTCAAAGTCTAACAAAATTGTTGTTGAGAAATCCACTGTCCCAGTTAGAACAGCTGAGGCAATTGAGAAAATTCTAACATACAATACTAATAGCAAGGGCATCAAGTATCAAATTCTGTCAAATCCTGAGTTTCTCTCTGAGGGAACAGCTATTCAAGACCTTCTGAACCCTGACCGGGTTCTGATTGGAGGGAATCAATGCCCTGAAGGTTTACAAGCAATTCAAAAACTGAAGGCTATATATGCACATTGGGTGCCTGAAGACAGAATCATAACAACCAATTTGTGGTCTGCAGAACTGTCCAAGTTAGCTGATAATGCCTTTTTGGCACAAAGGATTTCATCTATTAATTCTATGTCTGCCTTATGTGAGGCCACTGGAGCTGAAGTTTCACAAGTTTCTCATGCTCTAAGCAAAAACACCAAAATTGGACCTAAGTTCCTCAATGCTAGTGTTGGTTTTGGTGGCTCTTGTTTTCAAAAGGACATACTCAACTTGGTGTACATATGTGAGAGCAATGGCCTCAATGAAGTGGCTAATTACTGGAAACAAGTGATCAAGATGAATGACTACCAAAAAAATAGGTTTGTGAGGCGGGTCGTGACATCGATGTTCAACACGGTTTCGGGTAAGAAGATTGCAATTCTGGGGTTTGCCTTCAAGAAAGATACTGGTGACACTAGGAAGACTCCTGCAATTGATGTCTGCAAAGGCCTATTGGGAGATAACGCGTGCTTGAGCATCTACGATCCATGTGTTATCGAGGAGCAGATTCAAAAGGATTTGTCAATGGATGGCGTTGAATTTGACCATCCTGTCCACCTGCAGCCAATGAATTCTACTATGGTGAAACAAGTTAGTATTGTTGGGGATGCTTATGAGGCTACTAAAGATGCTCATGGGATATGCATTCTTACAGAGTGGGATGAGTTCAAGAACATTGATTTTCAAAGAGTGTATGACAGCATGCAGAAACCAGCATTTGTGTTTGATGGAAGAAACATATTGAATGCTGAGAAGTTGAGGGAGATTGGATTCATTGTGTACTCAATTGGGAGGCCATTAGAGCAATGGCTAATAAGCATGGCCTAA 1440 0.4361 MVKICGIGAGYVGGPTMAVIALKCPSIEVAVVDISHSRISAWNSNKLPIYEPGLEQVVNQCRGKNLLFSTDVEKHVHEADIVFLSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSNKIVVEKSTVPVRTAEAIEKILTYNTNSKGIKYQILSNPEFLSEGTAIQDLLNPDRVLIGGNQCPEGLQAIQKLKAIYAHWVPEDRIITTNLWSAELSKLADNAFLAQRISSINSMSALCEATGAEVSQVSHALSKNTKIGPKFLNASVGFGGSCFQKDILNLVYICESNGLNEVANYWKQVIKMNDYQKNRFVRRVVTSMFNTVSGKKIAILGFAFKKDTGDTRKTPAIDVCKGLLGDNACLSIYDPCVIEEQIQKDLSMDGVEFDHPVHLQPMNSTMVKQVSIVGDAYEATKDAHGICILTEWDEFKNIDFQRVYDSMQKPAFVFDGRNILNAEKLREIGFIVYSIGRPLEQWLISMA 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00727 479 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 212 306 IPR014026 GO:0016616|GO:0051287
Gma17g00727 479 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 216 IPR036291 -
Gma17g00727 479 Gene3D - 211 242 - -
Gma17g00727 479 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 186 IPR001732 GO:0016616|GO:0051287
Gma17g00727 479 PIRSF UDPglc_GDPman_dh 2 469 IPR017476 GO:0016616
Gma17g00727 479 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 450 IPR017476 GO:0016616
Gma17g00727 479 Gene3D - 1 210 - -
Gma17g00727 479 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 317 465 IPR036220 -
Gma17g00727 479 Gene3D - 243 478 - -
Gma17g00727 479 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 212 311 IPR008927 -
Gma17g00727 479 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 478 IPR028356 GO:0003979
Gma17g00727 479 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 453 IPR014027 GO:0016616|GO:0051287
Gma17g00727 479 PIRSF UDPglc_DH_euk 1 479 IPR028356 GO:0003979
Gma17g00727 479 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 3 1 478 - -
Gma17g00727 479 SMART UDPG_MGDP_dh_C_a_2_a 330 454 IPR014027 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00727 Gma-Chr17 6155182 6156745 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00220 05 2023721 2025857 Gma17g00727 17 6155182 6156745 ECH
Gma19g00264 19 3574815 3577817 Gma17g00727 17 6155182 6156745 ECH
Gma17g00727 17 6155182 6156745 Gma17g00727 17 6155182 6156745 ECH
Gma17g00727 17 6155182 6156745 Gma05g00220 05 2023721 2025857 GST