Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00827 ATGGAGGAATACACTAGTAATAATCACTTGAGTGAAAACACAGGTCCAAGTCCAAGTACTCCAAGGCCAAATTTCTTGTACTCTTCAGCTAGTGGTGGAAACCATAATCATCAGCATCAGCATCATAGCCATCACCACCACCACCACCACCAGTTTCCAATCAACACCTTTCATCTTCAATCGGGTGGATCAGATCATTGCTTTCAGTCTGATCAAGTTTCACCACACCCTTCTGTCAAATCCGAAGCCAGCACTTCTCAGCTCCACGCTCCGATTTTCCACTACCCTTTAATGAGAGGAAACCTTCACAACACTATGCATCATCCTCAGCAACAAGGAGGGAGCCCAACTAGCTCCACTGGTGAAGTTGAAGCCATAAAAGCTAAAATCATTGCTCACCCTCAGTACTCCAATGTTTTAGAAGCCTACATGGATTGTCAAAAGATAGGAGCTCCACCCGAAGTGGTGGCGCGTATGGCTGCGGCTAAGCAAGAGTTTGAGGCACGGCAAAGATCTTCAGTTGGTTCAAGGGAAACTTCAAAAGACCCTGAACTTGACCAATTCATGGAAGCATACTATGACATGCTTGTGAAGTATAGAGAGGAATTAACAAGGCCTATTCAAGAGGCTATGGATTTCATGCGAAGGATAGAAACTCAGCTAAATATGCTTTGCAATGGACCCGTGCGGATCTTCTCTGATGATAAATGTGAAGGTGCCGGTTCATCAGAAGAGGATCAAGACAACAGTGGAGGAGAAACAGAACTTCCCGAGATTGATCCCCGAGCAGAAGACCGTGAACTCAAAAACCACTTGCTGAAGAAGTACAGTGGTTACTTAAGTAGCCTTAAGCAAGAACTCTCCAAGAAGAAAAAGAAAGGGAAACTTCCCAAAGATGCTAGGCAAAAGCTACTTAACTGGTGGGAATTACATTACAAATGGCCATATCCTTCGGAATCAGAGAAGGTGGCATTGGCTGAATCAACTGGTTTGGACCAAAAGCAAATAAATAACTGGTTCATAAACCAGAGGAAGAGGCATTGGAAACCATCTGAAGACATGCAATTTATGGTGATGGATGGCCTGCATCCGCAGAGTGCAACTCTCTATATGGATGGTCACTACATGGCAGATGGTCACTACCGTCTAGGACCATGA 1158 0.4465 MEEYTSNNHLSENTGPSPSTPRPNFLYSSASGGNHNHQHQHHSHHHHHHHQFPINTFHLQSGGSDHCFQSDQVSPHPSVKSEASTSQLHAPIFHYPLMRGNLHNTMHHPQQQGGSPTSSTGEVEAIKAKIIAHPQYSNVLEAYMDCQKIGAPPEVVARMAAAKQEFEARQRSSVGSRETSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLCNGPVRIFSDDKCEGAGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQSATLYMDGHYMADGHYRLGP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00827 385 Pfam KNOX1 domain 125 167 IPR005540 GO:0003677|GO:0005634
Gma14g00827 385 ProSitePatterns 'Homeobox' domain signature. 325 348 IPR017970 GO:0000981|GO:0006355
Gma14g00827 385 Gene3D - 292 354 - -
Gma14g00827 385 MobiDBLite consensus disorder prediction 1 84 - -
Gma14g00827 385 CDD homeodomain 299 351 IPR001356 GO:0003677
Gma14g00827 385 SMART KNOX1_2 124 168 IPR005540 GO:0003677|GO:0005634
Gma14g00827 385 Pfam ELK domain 267 288 IPR005539 GO:0003677
Gma14g00827 385 Pfam KNOX2 domain 179 225 IPR005541 GO:0003677|GO:0005634
Gma14g00827 385 ProSiteProfiles 'Homeobox' domain profile. 287 350 IPR001356 GO:0003677
Gma14g00827 385 SUPERFAMILY Homeodomain-like 288 363 IPR009057 -
Gma14g00827 385 Pfam Homeobox KN domain 307 346 IPR008422 GO:0003677|GO:0006355
Gma14g00827 385 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 1 377 - -
Gma14g00827 385 MobiDBLite consensus disorder prediction 54 84 - -
Gma14g00827 385 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 377 - -
Gma14g00827 385 SMART HOX_1 289 354 IPR001356 GO:0003677
Gma14g00827 385 MobiDBLite consensus disorder prediction 1 36 - -
Gma14g00827 385 MobiDBLite consensus disorder prediction 235 263 - -
Gma14g00827 385 ProSiteProfiles ELK domain profile. 267 287 IPR005539 GO:0003677
Gma14g00827 385 MobiDBLite consensus disorder prediction 37 53 - -
Gma14g00827 385 SMART KNOX2_2 175 226 IPR005541 GO:0003677|GO:0005634
Gma14g00827 385 SMART ELK_2 267 288 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00827 Gma-Chr14 8804795 8810886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00827 64 385 Homeobox Transcription Factor Family AT4G08150 71.601 1.34e-158 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Gma14g00827 KNOX2 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00827 - - gmx:100807602 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00827 14 8804795 8810886 Gma14g00827 14 8804795 8810886 ECH
Gma17g02219 17 39946334 39952019 Gma14g00827 14 8804795 8810886 GST