Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00773 ATGGCTTTGGAAACTCTCAACTCACCAACAACAACCGCCCCATCTTTCCCCTTCGACGACCCAACTATTCCATGGGCCAAAAGAAAACGTTCAAAGCGTTGTTCACGCGACCACCCTTCGGAGGAAGAGTACCTCGCTCTCTGCCTCATCATGCTCGCTCGCGGCGGCACCACCCGCCGCGTCAGCACTCCACCGCCGCAACCGACTCCAGATCCTTCCACCAAGCTCAGTTACAAATGCTCCGTTTGCAACAAAAGCTTCCCCTCTTACCAAGCGCTCGGTGGACACAAGGCCAGTCACCGGAAACTCGCTGCCTCCGGCGGCGAAGACCAACCCACCACCACCTCCTCCGCCGCCAGCTCCGCCAACACCGCCTCCGGAGGTAGGACCCACGAGTGCTCCATCTGCCACAAGTCCTTCCCCACCGGACAGGCCCTCGGCGGACACAAACGTTGTCACTACGAAGGTAACAGTAATGGAAATAACAACAACAGTAACAGCTCTGTCACCGCCGCCTCGGAAGGCGTGGGGTCCACCCACACCGTGAGTCACGGCCACCACCGAGACTTCGATCTCAACATCCCGGCTTTTCCGGATTTTTCGACCAAGGTCGGAGAAGACGAGGTTGAGAGCCCTCACCCTGTCATGAAGAAGCCTCGCCCCTTCGTCATTCCCAAGATCGAAATCCCTCAATATCAATGA 702 0.5769 MALETLNSPTTTAPSFPFDDPTIPWAKRKRSKRCSRDHPSEEEYLALCLIMLARGGTTRRVSTPPPQPTPDPSTKLSYKCSVCNKSFPSYQALGGHKASHRKLAASGGEDQPTTTSSAASSANTASGGRTHECSICHKSFPTGQALGGHKRCHYEGNSNGNNNNSNSSVTAASEGVGSTHTVSHGHHRDFDLNIPAFPDFSTKVGEDEVESPHPVMKKPRPFVIPKIEIPQYQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00773 233 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Gma14g00773 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 100 IPR013087 -
Gma14g00773 233 PANTHER ZINC FINGER PROTEIN ZAT10 1 224 - -
Gma14g00773 233 ProSitePatterns Zinc finger C2H2 type domain signature. 133 153 IPR013087 -
Gma14g00773 233 MobiDBLite consensus disorder prediction 98 130 - -
Gma14g00773 233 SUPERFAMILY beta-beta-alpha zinc fingers 78 153 IPR036236 -
Gma14g00773 233 Pfam C2H2-type zinc finger 131 154 - -
Gma14g00773 233 Pfam C2H2-type zinc finger 78 102 - -
Gma14g00773 233 MobiDBLite consensus disorder prediction 1 38 - -
Gma14g00773 233 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 224 IPR044653 GO:0003700
Gma14g00773 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 131 158 IPR013087 -
Gma14g00773 233 MobiDBLite consensus disorder prediction 108 130 - -
Gma14g00773 233 Gene3D Classic Zinc Finger 109 184 - -
Gma14g00773 233 MobiDBLite consensus disorder prediction 157 180 - -
Gma14g00773 233 MobiDBLite consensus disorder prediction 157 190 - -
Gma14g00773 233 MobiDBLite consensus disorder prediction 1 17 - -
Gma14g00773 233 SMART c2h2final6 78 100 IPR013087 -
Gma14g00773 233 SMART c2h2final6 131 153 IPR013087 -
Gma14g00773 233 Gene3D Classic Zinc Finger 77 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00773 Gma-Chr14 7946425 7947160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00773 1 220 C2H2 Transcription Factor Family AT1G27730 54.077 4.14e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma14g00773 zf-C2H2_6 1.6e-12 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00773 14 7946425 7947160 Gma14g00773 14 7946425 7947160 ECH
Gma17g02264 17 40519119 40520278 Gma14g00773 14 7946425 7947160 GST
Gma14g00773 14 7946425 7947160 Gma04g00419 04 3637757 3639928 PCT
Gma14g00773 14 7946425 7947160 Gma06g00408 06 3516597 3517864 PCT
Gma04g00419 04 3637757 3639928 Gma14g00773 14 7946425 7947160 PCT
Gma06g00408 06 3516597 3517864 Gma14g00773 14 7946425 7947160 PCT