Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01661 ATGTCTGAAGAAACACGGAGAATTGTGGTGATCCACTATGCATCAAGAGACTTCAATACAAGTGCCATTAAAGTTGTCATGGAGGGATATTCGCTTGGGCATGGAGACAAGCTTACACTTCTTGTAGTTCTTCGCCATGCTAATAGTCCTAGTAGGATTCCCTTCATTGCATCTGCCAGATTGCGTGGATTATTTGAGACTGATCACAAAATTGTTGAGAAAGAGGTTGCCAAGATGAAAGAAGAGATCCTTAATAATGCAAGCATAAGGGAAATCTCCGAGCAGTGTGAAGCAGAAAGGATCCAGTTCCGGATAGAAGTGCTTCAAGGCAATTTACCTGAGGTTGCTGTAAATGCTGCCACCCGTTTGGAGGCAAAAACAGTGATACTTGATAGACAGATGAAGAAATATAAGAAGAATTTCAAGCAGAGTCTCTCTTGTGCTTTACTAATAATGAACCGTGACAACACTTTGCGACACTTGAGAGGACCAAGGGAAACGCAGCTGTCAGATGGAAGCAATGGCAATGCAAATTTTGCAACAGGTTCCTATTCTAAATCTCCACAAAGAATACAGCAAGTCGCAAATGCAATTTTCTGCTCCAATTCCAGCTCTTCAATTCAAACTCTTACAAAGGTTGTGTGCCCCCAATCTCATTCTCAAATGAAAAAATTCCTTGACAATAGAGAACAAGACATGGCAAGAGGGTATTGCATATTACCAACTTCTGATACTCGAAATACTAATCATACTGACTTGTATCACATAGAGACACCAGTGGAACATAGCAACAACCCTGAATCATATCAAATAGTTGAACAATTTAAAAATTCTGTTTGCTCAGTATGCAATAACAGAAGACCAAAATTTGAACCACTGAAAGAATTCACATACGCGGAGCTGCATGAAGCCACACAGGGTTTTACCCCAAAGAACTATTTGTCAGAAGGTGGATTTGGTTCTGTCTACAAAGGGAAGCTGCAAGGAGGACTCAGGATTGCCGTGAAGCAACACAAGTGTGCAAGCTTCCAAGGAGATAAGGAATTCAAATCTGAAGTTAATGCACTCAGCAGAGCAATACATGAGAATGTGGTTATGCTGCGTGGATCTTGTTCAGAAGGAAATAACAGGCTTCTTGTGTATGAATTTGTTTGCAATGGCTCGCTCGACCAACATTTATCGCAACACTCACGTAAACCTCTTAGCTGGGCAGAAAGGATCAAAGTAGCTATTGGAGCTGCAAAAGGCTTATTGTTCTTGCATCAGAACAATATAATACACAGAGATGTGAGACCTAGTAACATCCTTGTCACACATGACTATGAAGCAATGCTTGGAGATTTTGGTCTAGCTAGAACTGAACAAATGGACTCCTTATACTCCACAGATGTAGTTGGAACTATAGGGTATTTGGCACCAGAATATGCTGAATCTGGAAAAATGTCAACCAAGACAGATGTGTATTCTTTTGGTGTGGTTCTTCTTCAGCTAATAACTGGAATGAGGACTGCAGACAAACGGCTTGGAGATAAAAGTCTTGTGGGATGGGCTAGGCCACTATTGAAAGAAAGGAACTATCCCGATCTAATTGATGAAAGGATGATGGAAAATCATGATTGCCATCAGCTCTTTTGGATGATTCGTCTAGCAGAAAAATGTCTCAGCAGGGATTCTCAGAGGCGATTATCAATGGATACTGTGGTCACTGCCTTAACTCATATACTTGAAGGCAACACATGCAGTGTCGTACTGAGAGACTGTTCTCCAGCTCGGTCAGATTCATCCTATGACATGTCAGACTTACTTATATCAGATGCCTCTCAGAAATTAGAAGGTGAAGATGCAAGCATCTATGCAGGATATGCTCCCATTTGGTTAAGACCCCCACCATCTCCTCCGTTAGGAAGCACTTCATCATGTACATCAAGCATGTTCACAGGGCCAAGTGAATCTTCTTTAGAAGAGTTGTCCAATGATGAGAATAAGGGTAAGAAGCCAAATGATCAAGGTGGGATATTTTAA 2022 0.4125 MSEETRRIVVIHYASRDFNTSAIKVVMEGYSLGHGDKLTLLVVLRHANSPSRIPFIASARLRGLFETDHKIVEKEVAKMKEEILNNASIREISEQCEAERIQFRIEVLQGNLPEVAVNAATRLEAKTVILDRQMKKYKKNFKQSLSCALLIMNRDNTLRHLRGPRETQLSDGSNGNANFATGSYSKSPQRIQQVANAIFCSNSSSSIQTLTKVVCPQSHSQMKKFLDNREQDMARGYCILPTSDTRNTNHTDLYHIETPVEHSNNPESYQIVEQFKNSVCSVCNNRRPKFEPLKEFTYAELHEATQGFTPKNYLSEGGFGSVYKGKLQGGLRIAVKQHKCASFQGDKEFKSEVNALSRAIHENVVMLRGSCSEGNNRLLVYEFVCNGSLDQHLSQHSRKPLSWAERIKVAIGAAKGLLFLHQNNIIHRDVRPSNILVTHDYEAMLGDFGLARTEQMDSLYSTDVVGTIGYLAPEYAESGKMSTKTDVYSFGVVLLQLITGMRTADKRLGDKSLVGWARPLLKERNYPDLIDERMMENHDCHQLFWMIRLAEKCLSRDSQRRLSMDTVVTALTHILEGNTCSVVLRDCSPARSDSSYDMSDLLISDASQKLEGEDASIYAGYAPIWLRPPPSPPLGSTSSCTSSMFTGPSESSLEELSNDENKGKKPNDQGGIF 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01661 673 MobiDBLite consensus disorder prediction 632 673 - -
Gma13g01661 673 Pfam Protein tyrosine and serine/threonine kinase 312 571 IPR001245 GO:0004672|GO:0006468
Gma13g01661 673 MobiDBLite consensus disorder prediction 636 654 - -
Gma13g01661 673 Gene3D Phosphorylase Kinase; domain 1 270 383 - -
Gma13g01661 673 PANTHER TYROSINE KINASE FAMILY PROTEIN 7 643 - -
Gma13g01661 673 SUPERFAMILY Protein kinase-like (PK-like) 292 585 IPR011009 -
Gma13g01661 673 ProSitePatterns Tyrosine protein kinases specific active-site signature. 425 437 IPR008266 GO:0004672|GO:0006468
Gma13g01661 673 ProSiteProfiles Protein kinase domain profile. 308 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01661 673 SMART tyrkin_6 308 571 IPR020635 GO:0004713|GO:0006468
Gma13g01661 673 Gene3D Transferase(Phosphotransferase) domain 1 384 586 - -
Gma13g01661 673 PANTHER OS01G0253100 PROTEIN 7 643 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01661 Gma-Chr13 31476319 31485238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01661 296 571 Trihelix Transcription Factor Family AT1G70460 47.902 2.67e-80 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma13g01661 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02775 06 51585912 51593382 Gma13g01661 13 31476319 31485238 PCT
Gma13g01661 13 31476319 31485238 Gma06g02775 06 51585912 51593382 PCT