Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00966 ATGGGTCGCCTTCTTCTCTTTCTCATTATTCTCAGCCTTGTCGCATTCTCTTTCCTCTCAGACGTACAATCAGCATCGTTCAAGATTGTGAACAAGTGCCGCCACACGATATGGCCAGGATTACTCTCCGGCGCCACATCACCGCCGCTTCCCACCACTGGATTCACCCTCGAGAGCGGCAAATCAAGGATTGTAAAAATCCCGAAGTCTTGGTCGGGTCGGATATGGGCACGGACCCTCTGCGGCCAAGACTCTGACGGAAAATTCTCTTGCGCCACCGCCGACTGCGGCTCCGGCAAAGTACAGTGCGTTGGCGGGGCCAAACCTCCGGCGACATTGGCGGAATTCACTCTCAACGGTGCCGACGGGTTGGACTTCTACGACGTGAGTTTGGTCGACGGTTACAACCTTCCGATGCTGATCGTCGCCAAGGACGGAACCAGGGGCGGGTGCAGTGCCACCGGCTGCCTCGTCGACCTCAACGGCGGGTGTCCGGCGGAGCTGAGGGTGGCGCGTTCGAACGGCAGCCGCGGGAGCGTGGCGTGCCGGAGCGCGTGCGAGGCCTTCGGGGATCCTCGTTTTTGCTGCAGTGAGGCGTACTCGACGCCTGACATGTGTGGTCCTTCTCCTTATTCGTTGTTCTTCAAGCACGCTTGCCCACGCGCGTATAGCTACGCGTACGATGACAAGACCAGCACCTACACATGTGCCAATGCTAACTATTTGATTATTTTCTGCCCCTTCCCCTATACCAGCCAAAAACTGTTGGGAGTACGAAAAGATGGGGCACAGCTTCCTCTGGTAAATAAAACTATGATGTACTTATCAAGGCTACAATCAGGTGGTTCTTCACCATCAGGTCTGATTCAAACGCAGAGTATAATAGCTTATGTTGCCTCTATTTTTTTGGTGGCTTTCTTCCTCTTCTGCCCTTTTTAG 939 0.5453 MGRLLLFLIILSLVAFSFLSDVQSASFKIVNKCRHTIWPGLLSGATSPPLPTTGFTLESGKSRIVKIPKSWSGRIWARTLCGQDSDGKFSCATADCGSGKVQCVGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKDGTRGGCSATGCLVDLNGGCPAELRVARSNGSRGSVACRSACEAFGDPRFCCSEAYSTPDMCGPSPYSLFFKHACPRAYSYAYDDKTSTYTCANANYLIIFCPFPYTSQKLLGVRKDGAQLPLVNKTMMYLSRLQSGGSSPSGLIQTQSIIAYVASIFLVAFFLFCPF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00966 312 PANTHER OS03G0233200 PROTEIN 6 258 IPR001938 -
Gma11g00966 312 CDD TLP-PA 26 246 - -
Gma11g00966 312 Gene3D Thaumatin 25 247 IPR037176 -
Gma11g00966 312 SMART tha2 27 247 IPR001938 -
Gma11g00966 312 Pfam Thaumatin family 31 247 IPR001938 -
Gma11g00966 312 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 6 258 - -
Gma11g00966 312 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Gma11g00966 312 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Gma11g00966 312 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Gma11g00966 312 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Gma11g00966 312 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Gma11g00966 312 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Gma11g00966 312 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Gma11g00966 312 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00966 Gma-Chr11 8200145 8203297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00966 5 247 Receptor kinase-like Gene Family AT5G38280 51.626 3.83e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00966 - - gmx:100802252 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00294 12 2346936 2350185 Gma11g00966 11 8200145 8203297 GST