Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00707 ATGGCTCTGTTTTCACATCACCGACACTCTTATGAAACGCTCTTGGGCTTTCTACTCTTCCTCGTATTCAGAGAGGTTTCAGGGGCAACATTTACCTTCGTGAATAAGTGCGATCACACAGTATGGCCAGGGATTTTAGGAGCACCACAGCTAGGAAGCACAGGTTTTGAACTTGTGAAGGGAGGTTCTAAAAGCTTCCAGGCTCCGACCGGTTGGTCCGGTAGATTCTGGGGCAGAACCGGTTGCCAATTCGACGGTTCGGGAAAAGGAACGTGCGCCACCGCCGACTGCGGCTCCGGCGAGGTCAACTGCAACGGTGCCGGAGCCTCTCCGCCGGCCACGCTCGCCGAGTTCACGCTTGGCAACGGCTCCATGGACTACTACGACGTCAGCCTCGTCGACGGCTACAATCTGCCCATGATGGTGGTGGCCAGAGGCGGCTCGGGCTCCTGCGCCGCCACTGGCTGCGGCGAGGATCTCAACCAACGGTGCCCGTCGGAGCTGAGGGTGGAGGGCGGCGACGCGTGCCAGAGCGCGTGCGGCGCGTTCGGGAAACCGGAGTATTGCTGCAACGGTGCGTTTAGTAACCCCTCCACGTGCAAGCCTTCCATGTACTCGCAAATGTTCAAGTCCGTATGCCCCAAAGCCTATAGCTACGCCTACGATGATGCCACTAGCACCTTCACGTGTTCTGGCGCTGATTACACAATCACATTTTGTCCTTCTTCTCCAAGTTTAAAATCTTCAACGGATTCAAGTCCAAAGGGAATGGATGCAGGGTCTGGGTCTGGGGGAGGTTCATCAGTTGAGCAATCTGAATTAGCTTCTACTTCGTGGTTAGCCGACATGGCAACAGCAACAGGGGCCTCAACACGGACACGGCCTTTTGTTGCTTCGAAGGTCTCTTTTTCGGTGGTGGTTGTTTTCATTCTCTCTCTTTTGGTCGCTTAG 951 0.5542 MALFSHHRHSYETLLGFLLFLVFREVSGATFTFVNKCDHTVWPGILGAPQLGSTGFELVKGGSKSFQAPTGWSGRFWGRTGCQFDGSGKGTCATADCGSGEVNCNGAGASPPATLAEFTLGNGSMDYYDVSLVDGYNLPMMVVARGGSGSCAATGCGEDLNQRCPSELRVEGGDACQSACGAFGKPEYCCNGAFSNPSTCKPSMYSQMFKSVCPKAYSYAYDDATSTFTCSGADYTITFCPSSPSLKSSTDSSPKGMDAGSGSGGGSSVEQSELASTSWLADMATATGASTRTRPFVASKVSFSVVVVFILSLLVA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00707 316 CDD TLP-PA 30 240 - -
Gma11g00707 316 ProSiteProfiles Thaumatin family profile. 28 241 IPR001938 -
Gma11g00707 316 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 22 266 - -
Gma11g00707 316 PANTHER OS03G0233200 PROTEIN 22 266 IPR001938 -
Gma11g00707 316 SUPERFAMILY Osmotin, thaumatin-like protein 29 242 IPR037176 -
Gma11g00707 316 MobiDBLite consensus disorder prediction 244 270 - -
Gma11g00707 316 Pfam Thaumatin family 35 241 IPR001938 -
Gma11g00707 316 SMART tha2 31 241 IPR001938 -
Gma11g00707 316 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Gma11g00707 316 Gene3D Thaumatin 29 241 IPR037176 -
Gma11g00707 316 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Gma11g00707 316 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Gma11g00707 316 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Gma11g00707 316 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Gma11g00707 316 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Gma11g00707 316 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00707 Gma-Chr11 5952090 5953890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00707 16 245 Receptor kinase-like Gene Family AT5G38280 49.004 3.78e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00707 - - gmx:100802906 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00707 11 5952090 5953890 Gma11g00707 11 5952090 5953890 ECH
Gma11g00707 11 5952090 5953890 Gma01g01691 01 52563669 52571431 ECH
Gma12g00295 12 2356356 2359059 Gma11g00707 11 5952090 5953890 ECH