Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00706 ATGGCCTCTTCAGCTCAATTTTCCACCACTTTGGTCGTACTATGTCTCTTCCAATTCCTAGCAGGTTCATATTCAACGACATTCACAATTGTGAACAAGTGCAGCTACACAGTTTGGCCCGGCATTTTAACCGGCGCCGGAACCTCACCGCTCTCCACCACCGGCTTCGTCTTACAACCCGGCGAGTCCAACGTGATCACCGTGCCGGCCGCCTGGTCCGGCCGCCTCTGGGGGCGGACCGTCTGCACCCAAGACGCCACCGGAAAATTCTCCTGCGTCACAGGCGACTGCGGCTCCTCCGCCGTGGAATGCAACGGCGCAGGAGCCGCCCCGCCGGCCACGCTCGCCGAGTTCACACTGAACGGCGCCGGCGGGCTTGATTTCTTCGACGTGAGCCTCGTCGACGGTTACAATCTCCCCATGATCGTGGAGCCACAGGGCGGAAGCGGCGCCGGAAACTGCAGCGCCACGGGGTGCGTGGTGGACTTAAACACGCCGTGCCCGACGGAGCTCAAGGTGATGAGCAGCGGAGATGGCGTGGCGTGCAAAAGCGCGTGTGAAGCATTCGATGATCCACAATACTGCTGTAGTGGCGCTTACGCGACGCCTGACACATGCAAACCCAGTTCATACTCGCAGTTCTTCAAGAGCGCGTGCCCACGCGCTTACAGTTACGCTTATGACGATGGCTCCAGCACCTTCACTTGTGCCTCAGCGGATTATACCATCACTTTCTGCCCCCAGCCATCCACTAGTTCGATTAAATCGGGGAACGGGAAATACCCAATGGCGGTGGACACTTCGGGTGGTAATGTGGACGTAAGAAAAAACAATGTTATGGCGGTGATTGCTTATGTTTTGGTGGCATTTGTGGCAACTCAATTAGGTGGCCCTTCACTGCCAAAGTTGCATTAA 915 0.5705 MASSAQFSTTLVVLCLFQFLAGSYSTTFTIVNKCSYTVWPGILTGAGTSPLSTTGFVLQPGESNVITVPAAWSGRLWGRTVCTQDATGKFSCVTGDCGSSAVECNGAGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMIVEPQGGSGAGNCSATGCVVDLNTPCPTELKVMSSGDGVACKSACEAFDDPQYCCSGAYATPDTCKPSSYSQFFKSACPRAYSYAYDDGSSTFTCASADYTITFCPQPSTSSIKSGNGKYPMAVDTSGGNVDVRKNNVMAVIAYVLVAFVATQLGGPSLPKLH 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00706 304 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Gma11g00706 304 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Gma11g00706 304 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Gma11g00706 304 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Gma11g00706 304 ProSiteProfiles Thaumatin family profile. 25 247 IPR001938 -
Gma11g00706 304 CDD TLP-PA 27 246 - -
Gma11g00706 304 PANTHER OS03G0233200 PROTEIN 8 267 IPR001938 -
Gma11g00706 304 PIRSF PR5 1 296 IPR001938 -
Gma11g00706 304 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 8 267 - -
Gma11g00706 304 Gene3D Thaumatin 26 247 IPR037176 -
Gma11g00706 304 SUPERFAMILY Osmotin, thaumatin-like protein 26 248 IPR037176 -
Gma11g00706 304 SMART tha2 28 247 IPR001938 -
Gma11g00706 304 Pfam Thaumatin family 32 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00706 Gma-Chr11 5938666 5940744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00706 7 252 Receptor kinase-like Gene Family AT5G38280 52.988 3.32e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00706 - - gmx:100806478 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00706 11 5938666 5940744 Gma01g01693 01 52588415 52590569 ECH
Gma16g01184 16 29370996 29373411 Gma11g00706 11 5938666 5940744 ECH
Gma17g02468 17 42718696 42722641 Gma11g00706 11 5938666 5940744 ECH
Gma11g00706 11 5938666 5940744 Gma11g00706 11 5938666 5940744 ECH
Gma12g00294 12 2346936 2350185 Gma11g00706 11 5938666 5940744 ECH
Gma11g00706 11 5938666 5940744 Gma16g01184 16 29370996 29373411 PCT
Gma11g00706 11 5938666 5940744 Gma02g00432 02 4400123 4402594 PCT
Gma16g01184 16 29370996 29373411 Gma11g00706 11 5938666 5940744 PCT
Gma02g00432 02 4400123 4402594 Gma11g00706 11 5938666 5940744 PCT