Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02775 ATGTCTCATCTACGCACACAAGTTAAACAAGAAAAACAACTCATGAACATCCAGGAAGCACATGAAACGATTGCACAACCTGTGTGCTCTGTGTGCAACAACACAAGACCAAAATTTGAATGCAACAAAAAGAGAGACTTCACCTATGCTGAGCTGTATGCATCCACACAAGGCTTTTCCCCAAAGAATTTTCTGTCTGAAGGGGGGTTTGGTTCTGTCTACAAAGGGACGTTGTATGGACAGAAGGTTGCTGTTAAGCTACTTAAACTTATGTGTGCAAACCACAAAGGAGAGAAGGAATTCAAGTCTGAAGTTGATGCACTCAGCAAAGCAAGGCATGAGAATGTGGTCAAACTGTTAGGATCATGCACCGAAGGGAATCATAGACTTCTTGTCTATGAATATGTCTGCAATGGTTCATTGGACCAACACTTATCACAACATTCTCGTAAACCTCTTAGCTGGAAGGACAGGGTGAAAGTAGCTATTGGAGCCGCCGAAGGATTGCTATACCTGCATGAGAACAACATCATACATAGAGACATGACACCAAACAACATTCTTCTTACACATGATTATGATGTATTGCTAGGGGATTTTGGTTTGGCTAGAACCGTACTCGAAGATTCCTCATACTCCACTGACTGTGTTGGGAATCTGACTTATATGGCACCAGAATATGCAGAATTTGGTAAAGTGTCAACTAAGACAGATGTGTATTCCTTTGGGGTGGTTCTGCTACAGCTAATAACTGGAATGAGGACCACAGACAAACGAGTTGGAGATAAAGGTCTAGTGGGATGGGCTAGACCACTACTAAAAGACTGGAAATGCCAATCACTTATTGATGGAAGGATGATAAACTCTCATGACTGCCATCAACTCTATTGGATGAGCCGTCTTGTTGGAAATTGTCTCCAGAGAGATCCTCAAAAGAGATTGAATATGAATACAATTCACTTCAAATTATGCGTTTCGCTGATCGGCTTCTCATCAAATCAAACGACGTCGCAGTTCCTTGATTATTTCCTTTTGTTGATCCGTGGAATCGCGCACACGGTGTTGGTGTGTGCTGTGAGGTAG 1083 0.4229 MSHLRTQVKQEKQLMNIQEAHETIAQPVCSVCNNTRPKFECNKKRDFTYAELYASTQGFSPKNFLSEGGFGSVYKGTLYGQKVAVKLLKLMCANHKGEKEFKSEVDALSKARHENVVKLLGSCTEGNHRLLVYEYVCNGSLDQHLSQHSRKPLSWKDRVKVAIGAAEGLLYLHENNIIHRDMTPNNILLTHDYDVLLGDFGLARTVLEDSSYSTDCVGNLTYMAPEYAEFGKVSTKTDVYSFGVVLLQLITGMRTTDKRVGDKGLVGWARPLLKDWKCQSLIDGRMINSHDCHQLYWMSRLVGNCLQRDPQKRLNMNTIHFKLCVSLIGFSSNQTTSQFLDYFLLLIRGIAHTVLVCAVR 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02775 360 Pfam Protein tyrosine and serine/threonine kinase 63 322 IPR001245 GO:0004672|GO:0006468
Gma06g02775 360 ProSitePatterns Tyrosine protein kinases specific active-site signature. 177 189 IPR008266 GO:0004672|GO:0006468
Gma06g02775 360 Gene3D Transferase(Phosphotransferase) domain 1 136 335 - -
Gma06g02775 360 PANTHER OS01G0253100 PROTEIN 5 320 IPR045271 GO:0004714|GO:0006468
Gma06g02775 360 ProSiteProfiles Protein kinase domain profile. 59 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02775 360 PANTHER TYROSINE KINASE FAMILY PROTEIN 5 320 - -
Gma06g02775 360 Gene3D Phosphorylase Kinase; domain 1 29 135 - -
Gma06g02775 360 SUPERFAMILY Protein kinase-like (PK-like) 42 329 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02775 Gma-Chr6 51585912 51593382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02775 41 319 Trihelix Transcription Factor Family AT5G38560 44.178 1.89e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma06g02775 PK_Tyr_Ser-Thr 7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02775 - - gmx:102663919 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02775 06 51585912 51593382 Gma13g01661 13 31476319 31485238 PCT
Gma13g01661 13 31476319 31485238 Gma06g02775 06 51585912 51593382 PCT