Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00440 ATGAAGCGCATGAATGAGAGTAACAACACCGATGATGGAAACAATCATAACTGGTTGGGGTTCTCTCTCTCGCCCCACATGAAAATGGAGGTTACTTCGGCAGCCACTGTTTCCGACAACAATGTTCCGACAAccttctacatgtccccttctcacatgtccAACTCCGGAATGTGTTACAGTGTCGGGGAAAATGGTAACTTCCATTCTCCTCTTACCGTTATGCCTCTCAAGTCTGATGGGTCACTTGGTATCTTGGAAGCTCTCAATAGATCACAAACGCAAGTGATGGTGCCAACTTCGTCTCCGAAATTGGAGGACTTCTTAGGTGGTGCAACtatgggaactcacgaatatgggaaccacgaGAGAGGTTTGAGCCTAGACAGCATCTATTATAACTCACAAAACGCAGAGGCTCAACCCAACAGAAACCTTCTTTCACATCCCTTCAGGCAACAAGGGCATGTGAATGTCGAAACACACCCTTATTACTCTGTATTTGCTTGTCGAGGTTTGTATCAGGCACCGTCGGAGGAAGAAGCAACAAAGGAAACGCACGTTTCAGTAATGCCTCAAATGACAGGAGGAGGTTTGCAAAACTGGGTAGCTCCAACAAGGGAGTATTCAACTCATCAGCAGATTCTGGAGCAGCAAATGAACTGTGGCATTTGGAATGAGAGAAGTGGGGTATCTGTTGGAACTGTGGGGTGTGGAGAGTTGCAATCTCTAAGCTTATCTATGAGTCCTGGTTCTCAGTCTAGTTGTGTCACTGCTCCTTCTGGAACAGATTCTGTGGCTGTGGATGCAAAGAAGAGAGGGCATGCTAAACTTGGTCAGAAGCAGCCTGTGCATAGAAAATCTATTGACACATTTGGGCAAAGAACGTCGCAGTATAGAGGCGTCACAAGGCATAGATGGACTGGTAGGTATGAAGCGCATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAGACTAGGAAAGGAAGACAAGGAGGTTATGATATGGAAGAAAAAGCTGCAAGAGCCTATGATCTCGCGGCTCTTAAGTACTGGGGACCTTCAACGCACATAAACTTTTCGATAGAAAATTACCAAGTTCAACTTGAGGAAATGAAGAACATGAGCAGACAGGAATACGTTGCACACTTGAGAAGAAAAAGCAGCGGATTTTCTAGAGGTGCTTCAATATACAGAGGGGTCACAAGGCACCACCAACATGGAAGATGGCAAGCGAGGATAGGCAGAGTTGCTGGGAACAAAGACCTTTACCTTGGGACATTCAgcactcaagaggaagcagcagaagcatacgatatagccgcAATAAAATTCCGCGGCGCGAATGCAGTCACAAACTTTGACATTTCAAGATACGATGTCGAGAGAATCATGGCCAGTAGTAATCTCCTCGCTGGGGAGCTTGCAAGGCGAAATAAAGATAACGATCCAAGAAACGAGGCCATTGACTACAACAAGAGTGTAGTAACAAGTGTGAACAATGGGGAAACGGTTCAAGTTCAAGCAAGAAACAACAATGAAAATGATTCGGAGTGGAAGATGGTTTTATTTAATCACCCTTTACAGCAACAGGCAAATGGCAGTGACCATAAAATAATGAACTGCGGAAATTCCAGGAACAGTGCATTTTCTATGGCCCTACAAGATCTCATTGGGGTTGATTCGGTGGGTTCTGAGCAGCATAATATGCTGGATGATTCTAGCAAAATTGGGACTCATTTTTCAAACCCGTCCTCGCTGGTGACAAGTTTAAGCAGCTCAAGAGAGGCTAGTCCTGAGAAAATGGGTCCCTCGCTTCTGTTCCCAAAGCCTCCTCCAATGGAAACAAAGATTGTGAACCCCATTGGTACGAGTGTTACCTCTTGGTTACCCTCACCAACGGTTCAAATGAGGCCATCTCCTGCTATCTCTTTGTCTCACTTGCCAGTTTTTGCTGCTTGGACTGATACTTAA 1974 0.4296 MKRMNESNNTDDGNNHNWLGFSLSPHMKMEVTSAATVSDNNVPTTFYMSPSHMSNSGMCYSVGENGNFHSPLTVMPLKSDGSLGILEALNRSQTQVMVPTSSPKLEDFLGGATMGTHEYGNHERGLSLDSIYYNSQNAEAQPNRNLLSHPFRQQGHVNVETHPYYSVFACRGLYQAPSEEEATKETHVSVMPQMTGGGLQNWVAPTREYSTHQQILEQQMNCGIWNERSGVSVGTVGCGELQSLSLSMSPGSQSSCVTAPSGTDSVAVDAKKRGHAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYQVQLEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDISRYDVERIMASSNLLAGELARRNKDNDPRNEAIDYNKSVVTSVNNGETVQVQARNNNENDSEWKMVLFNHPLQQQANGSDHKIMNCGNSRNSAFSMALQDLIGVDSVGSEQHNMLDDSSKIGTHFSNPSSLVTSLSSSREASPEKMGPSLLFPKPPPMETKIVNPIGTSVTSWLPSPTVQMRPSPAISLSHLPVFAAWTDT 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00440 657 Pfam AP2 domain 298 353 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 Pfam AP2 domain 397 447 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 655 - -
Gma06g00440 657 Gene3D AP2/ERF domain 397 457 IPR036955 GO:0003700|GO:0006355
Gma06g00440 657 Gene3D AP2/ERF domain 297 363 IPR036955 GO:0003700|GO:0006355
Gma06g00440 657 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 14 655 - -
Gma06g00440 657 MobiDBLite consensus disorder prediction 585 612 - -
Gma06g00440 657 SUPERFAMILY DNA-binding domain 297 363 IPR016177 GO:0003677
Gma06g00440 657 MobiDBLite consensus disorder prediction 585 599 - -
Gma06g00440 657 CDD AP2 396 457 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 ProSiteProfiles AP2/ERF domain profile. 397 455 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 PRINTS Ethylene responsive element binding protein signature 299 310 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 PRINTS Ethylene responsive element binding protein signature 437 457 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 CDD AP2 297 360 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 ProSiteProfiles AP2/ERF domain profile. 298 361 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 SMART rav1_2 397 461 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 SMART rav1_2 298 367 IPR001471 GO:0003700|GO:0006355
Gma06g00440 657 SUPERFAMILY DNA-binding domain 396 457 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00440 Gma-Chr6 3751765 3754975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00440 1 481 AP2-EREBP Transcription Factor Family AT4G37750 52.264 1.89e-157 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Gma06g00440 AP2 4.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00440 K09285 - gmx:100802454 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00440 06 3751765 3754975 Gma06g00440 06 3751765 3754975 ECH
Gma04g00443 04 3932578 3935871 Gma06g00440 06 3751765 3754975 GST
Gma17g02230 17 40107426 40111319 Gma06g00440 06 3751765 3754975 PCT
Gma14g00807 14 8500654 8504925 Gma06g00440 06 3751765 3754975 PCT
Gma06g00440 06 3751765 3754975 Gma17g02230 17 40107426 40111319 PCT
Gma06g00440 06 3751765 3754975 Gma14g00807 14 8500654 8504925 PCT