Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00438 ATGTTGTTCCACGAAGACGAAGCGGTTCAGCTCCCGTGTACTCCGGTTCACGAAACCATGCTGACCGAAAGCGAACTCGAAGACCTCTTTTCTCTCATAAACCAATCGAGAGACCAGCCCAGCCCGGGGTCCGGTTCGCAAGGGTCAAACCGGGCGGTTTACTCGCCAGAGGAACGAAAGTTGAGACGCATGAAATCGAACCGGGAATCGGCCCGAAGGTCCCGCTACAGAAAGAAGCAGCATATGGAGAATCTAACGAGCCAACTGAACCAGTTGAGAATCCAAAATCGGTTAATCAAAAACCAACTAGCCTCCACCATGCACCAGCACCTCCTACTATCCCTACATAACGACCATCTTAAATCCGAATCCGTTGCCCTCATGGCCACACTTTCGGATCTATGTGGGATTTTAGGCACCATGCTTGCACATTATTAA 438 0.5046 MLFHEDEAVQLPCTPVHETMLTESELEDLFSLINQSRDQPSPGSGSQGSNRAVYSPEERKLRRMKSNRESARRSRYRKKQHMENLTSQLNQLRIQNRLIKNQLASTMHQHLLLSLHNDHLKSESVALMATLSDLCGILGTMLAHY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00438 145 MobiDBLite consensus disorder prediction 35 53 - -
Gma04g00438 145 Pfam Basic region leucine zipper 56 104 IPR004827 GO:0003700|GO:0006355
Gma04g00438 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 104 IPR004827 GO:0003700|GO:0006355
Gma04g00438 145 CDD bZIP_plant_GBF1 60 110 IPR045314 GO:0003700|GO:0006355
Gma04g00438 145 Coils Coil 82 102 - -
Gma04g00438 145 MobiDBLite consensus disorder prediction 35 83 - -
Gma04g00438 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 18 144 - -
Gma04g00438 145 SMART brlzneu 55 126 IPR004827 GO:0003700|GO:0006355
Gma04g00438 145 Gene3D - 57 110 - -
Gma04g00438 145 PANTHER BZIP TRANSCRIPTION FACTOR 18 144 - -
Gma04g00438 145 SUPERFAMILY Leucine zipper domain 59 113 IPR046347 GO:0003700|GO:0006355
Gma04g00438 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00438 Gma-Chr4 3882996 3883516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00438 2 120 bZIP Transcription Factor Family AT3G49760 37.008 1.92e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma04g00438 bZIP_2 4.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00438 - - gmx:102661984 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00438 04 3882996 3883516 Gma06g00436 06 3702406 3703087 GST
Gma17g02238 17 40256523 40256960 Gma04g00438 04 3882996 3883516 PCT
Gma14g00798 14 8315573 8316657 Gma04g00438 04 3882996 3883516 PCT
Gma04g00438 04 3882996 3883516 Gma17g02238 17 40256523 40256960 PCT
Gma04g00438 04 3882996 3883516 Gma14g00798 14 8315573 8316657 PCT