Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00422 ATGGACCCCAGAATCTGGAGCAAACTACCTCCTGATGTTGTGGAACACATACTTTTGTTACTCCCTCTCAAAACACTCTTGAATCTCAGACCCACTTGCAAGGCCTTCACCTCTCTCCTCTTTTCACCTTCCTTTGTTTCCAAACACTCTTCTTCTTCTTCCTCACCCTTCTCTTCCTATCTCTTAATTTCCCACCCTCAGTGCCCTCACTATTTCCGTCTCTACGATTCCAACCTTTGCTCTTGGCGCACCCTCTCTCTATCCCTCTCTAACTCTCTCCACTTATCTGCTTCCTTCACTCTTGTTTCCTCTTCTGGTGGCCTCTTTTGTCTCTACAACCCCACCTCTTCTTCCTTTCTTGTGCACAACCTCTTTGTCAGGTCCTCTAGAAAAATCGAATCCCCAATAACTCGCTCTCGTCACTTGGGACATGTCACTTTTGTTACCACCCCTCTTGGCTACTACATAGTGCTTCTTTGTTCAAAGTCAACTTCCAACACCAGTGTCTTTGTTTACGACTCTAGTAAACTCTCTTGGCGGTGTTTTGAGGGTTTTAATGTTGTTTTCAGCGACAGTTTTCACCAGCAGGGTACTTTCTTTGATGGGGGGTTGTATTTCACCACCCCTGAACCGTTTTCGGTGGTGTTTTTTGATTTGGAGAGTGGTGAATGGGAGAGGTACGTTGCTGAGTTGCCACAACAAGTCACTTTCGTGAGGCTGGTGAGTGATGAAGAAGGGAAGTTGTATCTGCTTGGTGGGGTTGGGAACGATGGTATCTCGAGGAGCATCAAGTTGTGGGAATTGATAAAGGGTGAAAGGGTTTGGGTGGAAGTGGTGGGGTTGCCTGAGATTATGTGTAGAAAATTTGTGTCGGTTTGTTACCATAACTATGAGCATGTTTATTGCTTCTGGCACGAGGGAATGATCTGCGTTTGCTTCTATATGTGGCCGGAGATATTGTATTACAGTGTTCTGAGGAGGACTTGGGATTGGCTTCCAAGGTGCCCCTATTTGCCTCTGAAATTTAGCTGTGGTTTCAAGTGGTTTTCTTTTGTTCCAAAGCTCTATGCTTCGGTATGA 1080 0.4565 MDPRIWSKLPPDVVEHILLLLPLKTLLNLRPTCKAFTSLLFSPSFVSKHSSSSSSPFSSYLLISHPQCPHYFRLYDSNLCSWRTLSLSLSNSLHLSASFTLVSSSGGLFCLYNPTSSSFLVHNLFVRSSRKIESPITRSRHLGHVTFVTTPLGYYIVLLCSKSTSNTSVFVYDSSKLSWRCFEGFNVVFSDSFHQQGTFFDGGLYFTTPEPFSVVFFDLESGEWERYVAELPQQVTFVRLVSDEEGKLYLLGGVGNDGISRSIKLWELIKGERVWVEVVGLPEIMCRKFVSVCYHNYEHVYCFWHEGMICVCFYMWPEILYYSVLRRTWDWLPRCPYLPLKFSCGFKWFSFVPKLYASV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00422 359 Gene3D - 134 346 IPR015915 GO:0005515
Gma04g00422 359 Pfam F-box domain 6 45 IPR001810 GO:0005515
Gma04g00422 359 SUPERFAMILY F-box domain 3 91 IPR036047 GO:0005515
Gma04g00422 359 PANTHER F-BOX/KELCH-REPEAT PROTEIN 5 357 - -
Gma04g00422 359 Gene3D - 4 48 - -
Gma04g00422 359 SUPERFAMILY Kelch motif 69 344 IPR015915 GO:0005515
Gma04g00422 359 PANTHER F-BOX/KELCH-REPEAT PLANT PROTEIN 5 357 - -
Gma04g00422 359 ProSiteProfiles F-box domain profile. 3 49 IPR001810 GO:0005515
Gma04g00422 359 SMART fbox_2 9 49 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00422 Gma-Chr4 3660980 3662199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00422 - - gmx:100778667 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00422 04 3660980 3662199 Gma06g00411 06 3538059 3538952 GST
Gma14g00776 14 8021585 8023113 Gma04g00422 04 3660980 3662199 PCT
Gma04g00422 04 3660980 3662199 Gma14g00776 14 8021585 8023113 PCT