Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00224 ATGGATCAGTTAACACTAGCATTTCCATTTTTACTAACACTTCATCTGTTAGTATCAGGTGTAGTAGCAACAACATCGTTCACACTGGTTAACAAATGCGACTACACAGTGTGGCCAGGCATTCTCTCAAACGCAGGAATCGCCACGCTTCCAACAACAGGTTTCGTTCTTCAAACCGGAGAGTCCAAAACCGTAACCGCTCCAACCTCTTGGGGTGGCCGTTTCTGGGGCCGCACACTCTGCACGCAAGACTCCGCCGGAAAATTCTCTTGCCTCAGCGGCGATTGCGGCTCCGGCAAGCTCGAATGCGCCGGAAACGCCGCCACGCCGCCTGCTACCTTAGCCGAGTTCACTCTCGACGGCGCCGGAGGCCTCGATTTCTTCGACGTGAGCCTCGTGGACGGTTACAACGTGCCGATGCTGGTGGCTCCCCAGGGTGGCTCCGGCGATAACTGCACGAGCACTGGGTGCGTTGGGGACCTGAACGGCGCGTGTCCTTCGGAGCTTAGGGTTACGAGCGTGGATGGGAAACAGAGCGTGGCGTGTAAGAGCGCGTGCGAGGCGTTCGGGTCCCCGCAGTATTGCTGCAGCGGCGCGTATGGGTCGCCCACCACTTGCAAGCCTTCGCCTTACTCGCAGATTTTCAAGAACGCTTGCCCACGCGCCTACAGCTACGCGTACGATGACAAGACCAGCACGTTTACGTGCGCTTCTGCTGCGGCTTACACCATCACTTTTTGTCCTTCTCCTAGCAGTAACCCCAGTCAGAAATCGTGGCAAGGGCAAAACCCTAAATCAGATAGTAGTGGCTCGGCTTCGGCTTCTGCTTCTGGGTCGCCGCAACTTAACAACGGCACAATGGTATATGTAGGTAGCATGGATGAAAGTGAATTATGGTCCGCAGGTAGTACCCATGGGCCGGAATCTCAAACCATTGCGGGCTTTGTTAGTATCACCATCGCTGTTTGGCTCTTGTGCCACCTCTACTAA 990 0.5535 MDQLTLAFPFLLTLHLLVSGVVATTSFTLVNKCDYTVWPGILSNAGIATLPTTGFVLQTGESKTVTAPTSWGGRFWGRTLCTQDSAGKFSCLSGDCGSGKLECAGNAATPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMLVAPQGGSGDNCTSTGCVGDLNGACPSELRVTSVDGKQSVACKSACEAFGSPQYCCSGAYGSPTTCKPSPYSQIFKNACPRAYSYAYDDKTSTFTCASAAAYTITFCPSPSSNPSQKSWQGQNPKSDSSGSASASASGSPQLNNGTMVYVGSMDESELWSAGSTHGPESQTIAGFVSITIAVWLLCHLY 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00224 329 SMART tha2 27 248 IPR001938 -
Gma04g00224 329 PANTHER OS03G0233200 PROTEIN 4 275 IPR001938 -
Gma04g00224 329 CDD TLP-PA 26 247 - -
Gma04g00224 329 PANTHER BNAA02G17480D PROTEIN 4 275 - -
Gma04g00224 329 Pfam Thaumatin family 31 248 IPR001938 -
Gma04g00224 329 Gene3D Thaumatin 25 248 IPR037176 -
Gma04g00224 329 ProSiteProfiles Thaumatin family profile. 24 248 IPR001938 -
Gma04g00224 329 SUPERFAMILY Osmotin, thaumatin-like protein 26 249 IPR037176 -
Gma04g00224 329 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Gma04g00224 329 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Gma04g00224 329 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Gma04g00224 329 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Gma04g00224 329 MobiDBLite consensus disorder prediction 253 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00224 Gma-Chr4 1914820 1918644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00224 1 266 Receptor kinase-like Gene Family AT5G38280 51.292 3.57e-96 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00224 - - gmx:100780102 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00224 04 1914820 1918644 Gma12g00294 12 2346936 2350185 ECH
Gma04g00224 04 1914820 1918644 Gma04g00224 04 1914820 1918644 ECH
Gma04g00224 04 1914820 1918644 Gma06g00206 06 1818481 1822799 GST