Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01052 ATGGTAAAGATTTGCTGCATTGGAGCTGGCTATGTTGGTGGCCCAACCATGGCTGTGATTGCCTTGAAGTGTCCTGAGATCGAGGTGGTCGTGGTGGACATTGCTGCTCCACGAATCAACGCGTGGAACAGTGACCACCTCCCGATATACGAGCCCGGCCTTGATGATGTGGTGAAGCAGTGTAGGGGGAAGAATCTCTTCTTCAGCACTGATGTGGAGAAGCATGTTGCTGAGGCTGACATTGTCTTTGTCTCGGTGAACACACCGACAAAGACTCAGGGTCTTGGAGCCGGTAAGGCGGCTGATCTCACATATTGGGAGAGTGCTGCCAGGATGATTGCTGATGTATCAAAATCGGACAAGATCGTGGTTGAGAAATCGACCGTGCCTGTGAAAACAGCTGAGGCAATTGAGAGGATTCTGACTCACAATAGGAAAGGCATCAATTTCACAATTCTGTCAAACCCTGAGTTTCTTGCTGAGGGTACAGCAATTGCAGACCTGTTTAAGCCGGATCGAGTCCTCATCGGAGGCAGGGAAACCCCAGAGGGTCAAAAGGCTATTCATTCTCTGAAGAGTGTTTATGCCCATTGGGTTCCTGAGGACAGAATCCTTTGCACCAATTTGTGGTCTGCTGAACTCTCAAAGCTTGCAGCCAATGCTTTCCTGGCCCAGAGGATCTCCTCTGTGAATGCCATGTCGGCGCTTTGCGAGGCAACTGGTGCTGATGTCTCCCAGGTGTCACACTCAATCGGGACAGACTCGAGAATTGGACCAAAGTTCCTGAATGCCAGTGTTGGTTTTGGTGGATCATGCTTCCAGAAGGACATATTGAACTTGGTCTATATCTGTGAGTGCAATGGCCTACCAGAGGTGGCCAATTACTGGAAACAGGTCATCAAGGTGAATGACTACCAGAAAATGCGGTTCGTAAATCGCGTGGTGTCATCAATGTTCAACACAGTCTCAGGGAAGAAGATTGCTGTTTTGGGATTTGCTTTCAAGAAGGACACTGGTGACACTAGGGAGACCCCAGCCATTGATGTGTGCAAGGGCCTTTTGGGAGACAAGGCCAAGTTGAGCATATATGATCCTCAGGTCACTGAGGATCAAATCATGAGGGATTTAGCAATGAAGAAGTTTGATTGGGACCACCCTGCTCATCTTCAACCACTGAGTCCAACTTCCAACAAACAAGTATCTGTGGTTTGGGATGCCTATGAGGCAATCAAGGATGCACATGGCATCTGCGTTATGACTGAGTGGGATGAGTTCAAGAACCTTGATTACCAGAAGGTTTATGACAGCATGCAGAAGCCTGCATTCATTTTCGATGGCCGCAACGTCGTGGATGTTAACAAGCTGAGGGAAATTGGTTTCATTGTTTACTCCATTGGCAAACCTCTAGATTCATGGCTCAAGGACATGCCTGCAGTGGCTTAA 1443 0.4844 MVKICCIGAGYVGGPTMAVIALKCPEIEVVVVDIAAPRINAWNSDHLPIYEPGLDDVVKQCRGKNLFFSTDVEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIERILTHNRKGINFTILSNPEFLAEGTAIADLFKPDRVLIGGRETPEGQKAIHSLKSVYAHWVPEDRILCTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHSIGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKMRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIMRDLAMKKFDWDHPAHLQPLSPTSNKQVSVVWDAYEAIKDAHGICVMTEWDEFKNLDYQKVYDSMQKPAFIFDGRNVVDVNKLREIGFIVYSIGKPLDSWLKDMPAVA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01052 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 185 IPR001732 GO:0016616|GO:0051287
Gma02g01052 480 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 463 IPR036220 -
Gma02g01052 480 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Gma02g01052 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 451 IPR014027 GO:0016616|GO:0051287
Gma02g01052 480 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 201 IPR036291 -
Gma02g01052 480 SMART UDPG_MGDP_dh_C_a_2_a 328 452 IPR014027 GO:0016616|GO:0051287
Gma02g01052 480 Gene3D - 241 478 - -
Gma02g01052 480 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 448 IPR017476 GO:0016616
Gma02g01052 480 PIRSF UDPglc_GDPman_dh 2 467 IPR017476 GO:0016616
Gma02g01052 480 Gene3D - 209 240 - -
Gma02g01052 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Gma02g01052 480 Gene3D - 1 208 - -
Gma02g01052 480 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 480 IPR028356 GO:0003979
Gma02g01052 480 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 1 480 - -
Gma02g01052 480 PIRSF UDPglc_DH_euk 1 480 IPR028356 GO:0003979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01052 Gma-Chr2 11449474 11451946 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01052 02 11449474 11451946 Gma02g01052 02 11449474 11451946 ECH
Gma02g01052 02 11449474 11451946 Gma19g00264 19 3574815 3577817 ECH
Gma01g00531 01 7632786 7635482 Gma02g01052 02 11449474 11451946 GST
Gma01g01691 01 52563669 52571431 Gma02g01052 02 11449474 11451946 PCT
Gma20g00247 20 2997961 3000603 Gma02g01052 02 11449474 11451946 PCT
Gma02g01052 02 11449474 11451946 Gma01g01691 01 52563669 52571431 PCT
Gma02g01052 02 11449474 11451946 Gma20g00247 20 2997961 3000603 PCT