Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00432 ATGTCTCCGTTCTTCTCACATCATCCACTTTCTCCTCAACGATTCTTCATTTTCCTACTCATCCTGGCTTTCAGAGGGGTGAGAGTCTCAGCCACAACATTCACATTCGTGAACAAGTGTGACCACACGGTGTGGCCAGGTATTCTCGGAAAACCGGACATCGGAACAACTGGTTTCGAGCTCAAGAGAGGAAGCACGCGTACCTTCGACGGCCCGCCTGGTTGGTCGGGCCGCTTCTGGGGCCGAACCGGCTGCCAATTCGACCAATCCGGCCAGGGCACGTGCGCCACCGGCGACTGCGGCTCCGGCCAGGTAACCTGCAACGGTGCCGGCGCCACTCCGCCGGCCACCCTCGCCGAGTTCACGCTCGGCGAGGGAGCCCCGGACTACTACGACGTGAGCCTCGTCGACGGCTACAACCTCCCCATGATGGTGGACGCAAGCGGCGGCTCCGGCGCCTGCGCCGCCACGGGGTGCGGTGCCGACCTGAACCGGCGGTGTCCGGCGGAGTTGAGGGTGGACGGCGGCGACGCTTGCCAGAGCGCGTGCCGCGCTTTCGGGAAGCCGGAGTTTTGCTGCAGCGGGGCGTTTAATTCACCGGCGGCGTGCGCGCCGTCGATGTACTCGCAGATTTTTAAGGCTGCGTGCCCCAAATCTTATAGCTATGCGTTTGATGATGCTACGAGCACTTTTACGTGTACTGCCGCGGATTACACTGTCACATTTTGTCCCTTTTCTTCTCCAAGTTTGAAGTCATTAATGGAATCAGGGCCAGGATCATCGGTTGAGCAGGCAGCAGTAGCTACTACATCATGGATAGCCAATTTGGCCACAGGGGACTCCACAAGAAGCAGAAGCCAACCATTTTCAGCTTCCAACTCTGCATTTTTTGTGGCTGTCACTTTAATTCTTTCCTATTTAGTCTCATAG 930 0.5774 MSPFFSHHPLSPQRFFIFLLILAFRGVRVSATTFTFVNKCDHTVWPGILGKPDIGTTGFELKRGSTRTFDGPPGWSGRFWGRTGCQFDQSGQGTCATGDCGSGQVTCNGAGATPPATLAEFTLGEGAPDYYDVSLVDGYNLPMMVDASGGSGACAATGCGADLNRRCPAELRVDGGDACQSACRAFGKPEFCCSGAFNSPAACAPSMYSQIFKAACPKSYSYAFDDATSTFTCTAADYTVTFCPFSSPSLKSLMESGPGSSVEQAAVATTSWIANLATGDSTRSRSQPFSASNSAFFVAVTLILSYLVS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00432 309 ProSitePatterns Thaumatin family signature. 91 107 IPR017949 -
Gma02g00432 309 SMART tha2 34 244 IPR001938 -
Gma02g00432 309 Pfam Thaumatin family 38 244 IPR001938 -
Gma02g00432 309 Gene3D Thaumatin 32 244 IPR037176 -
Gma02g00432 309 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 8 268 - -
Gma02g00432 309 ProSiteProfiles Thaumatin family profile. 31 244 IPR001938 -
Gma02g00432 309 SUPERFAMILY Osmotin, thaumatin-like protein 32 244 IPR037176 -
Gma02g00432 309 PANTHER OS03G0233200 PROTEIN 8 268 IPR001938 -
Gma02g00432 309 CDD TLP-PA 33 243 - -
Gma02g00432 309 PRINTS Pathogenesis-related protein signature 33 45 IPR001938 -
Gma02g00432 309 PRINTS Pathogenesis-related protein signature 57 66 IPR001938 -
Gma02g00432 309 PRINTS Pathogenesis-related protein signature 78 89 IPR001938 -
Gma02g00432 309 PRINTS Pathogenesis-related protein signature 91 120 IPR001938 -
Gma02g00432 309 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Gma02g00432 309 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00432 Gma-Chr2 4400123 4402594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00432 16 281 Receptor kinase-like Gene Family AT5G38280 43.728 1.00e-74 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00432 - - gmx:100778987 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00432 02 4400123 4402594 Gma02g00432 02 4400123 4402594 ECH
Gma02g00432 02 4400123 4402594 Gma16g01184 16 29370996 29373411 ECH
Gma12g00295 12 2356356 2359059 Gma02g00432 02 4400123 4402594 ECH
Gma16g01184 16 29370996 29373411 Gma02g00432 02 4400123 4402594 GST
Gma11g00706 11 5938666 5940744 Gma02g00432 02 4400123 4402594 PCT
Gma02g00432 02 4400123 4402594 Gma11g00706 11 5938666 5940744 PCT