Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01691 ATGGCTCTGTTTTCAAATCACCGACACTCTTCCGAAGCGCTCTTGGGCTTTCTACTCTTCCTCGTATTCAGAGGGGTTTCAGTTTCAGGGGCAACATTTACCTTCGTGAACAAGTGCGATTACACAGTATGGCCAGGGATTTTAGGTACGCCGGAACTCGGAAGCACAGGCTTTGAACTTGCGAAGGGAGGTTCAAGAAGCTTCCAGGCTCCGACCGGCTGGTCCGGTAGATTCTGGGGCAGAACCGGTTGCCAATTCGACGGTTTGGGGAAAGGAACGTGCGCCACCGCGGACTGCGGCTCCGGCGAGGTCAACTGCAACGGCGCCGGAGCCTCCCCGCCGGCCACGCTAGCCGAGTTTACACTCGGCACCGGCTCCATGGACTACTACGACGTCAGCCTCGTCGACGGCTACAATCTGCCCATGATGGTGGTGGCCAGAGGCGGCTCGGGGTCCTGCGGCGCCACCGGGTGCGGTGAGGATCTCAACCGGCGGTGCCCGTCGGAGCTGAGGGTGGAGGGCGGCGACGCGTGCCAGAGCGCGTGCGGCGCGTTCGGGAAACCGGAGTATTGCTGCAACGGTGCGTTTAGTAACCCTTCCACGTGCAAGCCTTCCATGTACTCGCAAATGTTCAAGTCCGCATGCCCCAAAGCCTATAGCTACGCTTACGATGATGCCACTAGCACCTTCACGTGTTCCGGCGCTGACTACACAATCACATTTTGTCCTTCTTCTCCAAGTTTAAAGTCTTCAACGGATTCAAGTCCAAAGGGAATAGATGGAGGGTCAGGGTCTGTGGGAGGTTCATCGGTTGAGCAATCTGAATTAGCTTCTACTTCGTGGTTAGCCGACATGGCAACAGCTACAGGGGCCTCAACACGAACACGGCCTCTTGTTGCATCAAAGGTCTCTTTTTCTGTGGTGGTGGTTTTCATTCTCTCTCTTTTGGTC 951 0.5647 MALFSNHRHSSEALLGFLLFLVFRGVSVSGATFTFVNKCDYTVWPGILGTPELGSTGFELAKGGSRSFQAPTGWSGRFWGRTGCQFDGLGKGTCATADCGSGEVNCNGAGASPPATLAEFTLGTGSMDYYDVSLVDGYNLPMMVVARGGSGSCGATGCGEDLNRRCPSELRVEGGDACQSACGAFGKPEYCCNGAFSNPSTCKPSMYSQMFKSACPKAYSYAYDDATSTFTCSGADYTITFCPSSPSLKSSTDSSPKGIDGGSGSVGGSSVEQSELASTSWLADMATATGASTRTRPLVASKVSFSVVVVFILSLLV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01691 317 Pfam Thaumatin family 37 243 IPR001938 -
Gma01g01691 317 PRINTS Pathogenesis-related protein signature 56 65 IPR001938 -
Gma01g01691 317 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Gma01g01691 317 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Gma01g01691 317 PRINTS Pathogenesis-related protein signature 90 119 IPR001938 -
Gma01g01691 317 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Gma01g01691 317 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Gma01g01691 317 MobiDBLite consensus disorder prediction 246 270 - -
Gma01g01691 317 ProSiteProfiles Thaumatin family profile. 30 243 IPR001938 -
Gma01g01691 317 CDD TLP-PA 32 242 - -
Gma01g01691 317 SMART tha2 33 243 IPR001938 -
Gma01g01691 317 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Gma01g01691 317 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 7 268 - -
Gma01g01691 317 Gene3D Thaumatin 31 243 IPR037176 -
Gma01g01691 317 PANTHER OS03G0233200 PROTEIN 7 268 IPR001938 -
Gma01g01691 317 SUPERFAMILY Osmotin, thaumatin-like protein 31 244 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01691 Gma-Chr1 52563669 52571431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01691 18 263 Receptor kinase-like Gene Family AT5G38280 48.855 7.70e-75 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01691 - - gmx:100815652 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01691 01 52563669 52571431 Gma01g01691 01 52563669 52571431 ECH
Gma11g00707 11 5952090 5953890 Gma01g01691 01 52563669 52571431 ECH
Gma12g00295 12 2356356 2359059 Gma01g01691 01 52563669 52571431 ECH
Gma01g01691 01 52563669 52571431 Gma20g00247 20 2997961 3000603 GST
Gma01g01691 01 52563669 52571431 Gma01g00531 01 7632786 7635482 PCT
Gma01g01691 01 52563669 52571431 Gma02g01052 02 11449474 11451946 PCT
Gma01g00531 01 7632786 7635482 Gma01g01691 01 52563669 52571431 PCT
Gma02g01052 02 11449474 11451946 Gma01g01691 01 52563669 52571431 PCT