Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2021 ATGCCCTTCCACGAGCCGGTTCAATTCCGATGCCCCATGCTGACCGAAACCGAAATACAGGACCTACTTTCCCTCATTAACCAACCAGCCAGCCCAAGTTCCGGTTCGCAGGGTTCGAACCGGGCGGTTTACTCTTCCGAGGAAAGAAAGCTGAGGCGCATGCAATCGAACCGGGAATCGGCCCGAAGGTCCCGCAGCAGGAAGAAGAGACACTTAGAGAACCTCACAACCCAAGTGAACCGCTTGAGAATCGAAAACCGGGAACTCAAAAACCGGCTAGTCCTCACCATGCACCAGCATCTACTACTAACCATTCAGAATGACCAGCTACGATCCGAATCCTTTGCCCTTCTCACCACACTTTCGGAACTGTGTGGGATTTTACGCACCATGCTTTGA 399 0.5263 MPFHEPVQFRCPMLTETEIQDLLSLINQPASPSSGSQGSNRAVYSSEERKLRRMQSNRESARRSRSRKKRHLENLTTQVNRLRIENRELKNRLVLTMHQHLLLTIQNDQLRSESFALLTTLSELCGILRTML* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2021 132 Coils Coil 44 99 - -
Dod09g2021 132 Pfam bZIP transcription factor 48 93 IPR004827 GO:0003700|GO:0006355
Dod09g2021 132 SMART brlzneu 45 109 IPR004827 GO:0003700|GO:0006355
Dod09g2021 132 PANTHER BZIP TRANSCRIPTION FACTOR 23 132 - -
Dod09g2021 132 PANTHER BZIP TRANSCRIPTION FACTOR 44 23 132 - -
Dod09g2021 132 CDD bZIP_plant_GBF1 50 100 IPR045314 GO:0003700|GO:0006355
Dod09g2021 132 Gene3D - 47 102 - -
Dod09g2021 132 MobiDBLite consensus disorder prediction 27 74 - -
Dod09g2021 132 MobiDBLite consensus disorder prediction 45 61 - -
Dod09g2021 132 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 47 93 IPR004827 GO:0003700|GO:0006355
Dod09g2021 132 SUPERFAMILY Leucine zipper domain 49 101 IPR046347 GO:0003700|GO:0006355
Dod09g2021 132 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2021 Dod-Chr9 41741632 41742030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2021 40 113 bZIP Transcription Factor Family AT2G22850 52.000 8.14e-18 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod09g2021 bZIP_1 2.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2021 - - ccaj:109788674 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1985 08 46973727 46974280 Dod09g2021 09 41741632 41742030 PCT