Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2014 ATGAAGTCCATGAATGATAGCAACATCGATGATGGCAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGAGGTTACTACTTCTGGTCCTCCCAATCATCATCATCATCATCATCATCACTTCCATCATCAACAACACCAAGTTCACGCTTCTGCAGCAGCTCCTCCTGTCTCCAACACCGTTCCGACAACCTTCTACATGTCCCCTTCTCACATGAGCAACTCCGGAATCTGCTATGGTGTTGGGGAAAACGGTGCCTCCTTCCATTCCCCTTTGACTGTGATGCCTCTCAAGTCAGATGGTTCGCTTTGTATCATGGAAGCTCTGAGCAGATCACAACAAACACAAGTGATGGTGCCTACTTCATCTCCCAAACTGGAAGACTTTCTAGGTGGTGCAACTATGGGAACTGACGACTATGGAACCCACCAAAGAGAGGCAATGGCTTTAAGCCTTGACAGCATCTACTACGCCCAAAATGCAGAGTCCCAAGCCAACAGAGACCACTCCTTGGACCTTCTTTCAGAACCTTTCAGGCAGCAAGGGCATCCATACTACTCAGCACTTGGTTGCCACAACATGTACCAGGCAACCTTAGAGGAAGAACCCAAGGAAACACAGGCTGCAGTTTGCAGCTCCCAAATGCCTCAAATAGCAGAAGAAGAAGGCATTGGTTGCTTGAAGAACTGGGTGGCCCCAAGGGAGTATTCTGCAGCTTTGGAGCAGCAAGTGAACAGCGGCATGGGGGATGAGCGTGGAGCTGGTGGGACTGTGGGGACAGTTGGGTGTGGGGAGTTGCAGTCACTGAGCCTGTCAATGAGTCCTGGTTCTCAGTCAAGCTGTATCACGGTTCCTAGGCAGATCTCACCTTCTGGTAATGACTCGGTGGCAATGGATGGCAAGAAGAGAGGGTCTGCTAAGCTTGGCCAGAAGCAGCCTGTGCATAGGAAGTCCATCGACACATTCGGGCAGAGAACTTCGCAGTATAGAGGCGTCACAAGGCATAGATGGACTGGTAGATACGAAGCGCATTTGTGGGATAACAGTTGCAAGAAGGAAGGGCAGACCAGGAAAGGAAGACAAGTATATTTGGGGGGTTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTCGCCGCCCTTAAGTATTGGGGACCGTCAACGCACATTAACTTCCCGTTGGAAAATTACCAAGCGGAGCTTGAGGAAATGAAGAACATGAGTAGACAGGAATACGTAGCCCACTTGAGAAGAAAAAGCAGCGGATTTTCAAGGGGTGCTTCAATGTACAGAGGGGTGACAAGGTTCATTGTGATTGTCCTACGCTTTTTTCTTAGGAATTAG 1362 0.4905 MKSMNDSNIDDGNNHNWLGFSLSPHMKMEVTTSGPPNHHHHHHHHFHHQQHQVHASAAAPPVSNTVPTTFYMSPSHMSNSGICYGVGENGASFHSPLTVMPLKSDGSLCIMEALSRSQQTQVMVPTSSPKLEDFLGGATMGTDDYGTHQREAMALSLDSIYYAQNAESQANRDHSLDLLSEPFRQQGHPYYSALGCHNMYQATLEEEPKETQAAVCSSQMPQIAEEEGIGCLKNWVAPREYSAALEQQVNSGMGDERGAGGTVGTVGCGELQSLSLSMSPGSQSSCITVPRQISPSGNDSVAMDGKKRGSAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQAELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRFIVIVLRFFLRN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2014 453 PRINTS Ethylene responsive element binding protein signature 381 401 IPR001471 GO:0003700|GO:0006355
Dod09g2014 453 PRINTS Ethylene responsive element binding protein signature 334 345 IPR001471 GO:0003700|GO:0006355
Dod09g2014 453 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 13 442 - -
Dod09g2014 453 MobiDBLite consensus disorder prediction 28 47 - -
Dod09g2014 453 Gene3D AP2/ERF domain 332 401 IPR036955 GO:0003700|GO:0006355
Dod09g2014 453 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 442 - -
Dod09g2014 453 SMART rav1_2 333 405 IPR001471 GO:0003700|GO:0006355
Dod09g2014 453 CDD AP2 332 399 IPR001471 GO:0003700|GO:0006355
Dod09g2014 453 SUPERFAMILY DNA-binding domain 332 401 IPR016177 GO:0003677
Dod09g2014 453 Pfam AP2 domain 333 391 IPR001471 GO:0003700|GO:0006355
Dod09g2014 453 MobiDBLite consensus disorder prediction 285 299 - -
Dod09g2014 453 Coils Coil 400 420 - -
Dod09g2014 453 MobiDBLite consensus disorder prediction 285 321 - -
Dod09g2014 453 ProSiteProfiles AP2/ERF domain profile. 333 399 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2014 Dod-Chr9 41668762 41670919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2014 1 441 AP2-EREBP Transcription Factor Family AT4G37750 46.934 3.11e-106 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod09g2014 AP2 9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2014 K09285 - gmx:100798179 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1976 08 46819977 46824881 Dod09g2014 09 41668762 41670919 PCT