Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2010 ATGCTCGTCGAAATGGTGGATCCCTACGTCTTCGGATGGATCATATTCTCCATTCTGAGCCTCTTTACGCTAAACACTATGGTTTTCGCAGGGAACAAGGACGCAACCACCGCGATGACTCCCCGCGCCGAGAATGTAACCACCGCCACCGGAGAAGGCAGATCCTCGAACCGAAATGGCGACGCTGACGTCATCATTGTCGGTGCTGGCGTTGCCGGCGCCGCTCTCGCTCACACTCTAGGCAAGGATGGACGTAGAGTACTTGTCATTGAAAGAGATCTGACTGAACCTGACCGAATTGTTGGGGAGTTGCTGCAACCTGGAGGCTATCTCAAATTGATTGAGCTGGGACTCGAAGATTGTGTGGAAAATATTGATGCTCAGCAAGTGTATGGTTATGCTCTTTTCAAGGATGGGAAACATGCACGGCTCTCTTATCCCTTGGAGAAGTATCACTCAGATACTGCTGGCAGAAGTTTTCACAATGGGCGTTTTATTCAGAGGATGAGAGAGAAGGCCGCCTCCCTTCCCAATGTAAGACTAGAGCAAGGAACAGTTACTTCGCTACTTGAAGAGAAGGCGACAATTAAAGGTGTGCAGTACAAAAGTAAAGATGGTCAGGAATTGTCAGCATTTGCGCCTCTTACTATTGTTTGTGATGGCTGTTTCTCAAACTTGCGCCGCACTCTTTGTAATCCTCAGGTGGATGTTCCCTCTTGTTTTGTTGGCCTTGTCCTGGAGAATTGTGAACTTCCATGTGCAAATCATGGCCATGTCATACTAGGAGATCCTTCCCCAGTTCTGTTCTATCCTATAAGTAGCACAGAAGTTCGCTGTTTGGTTGATGTTCCTGGTCAGAAGGTTCCATCTATTTCCAACGGTGAAATGGCAAAGTACTTGAAGACAGTGATAGCTCCACAGCCTGTGGCATCCACCATAAACACTTTGGCAGGAGCCCTATACAAGGTTTTCTGTGCATCACCTGATCCGGCAAGGAAGGATATGCGCCAAGCTTGCTTCGATTATCTGAGTCTTGGAGGTCTATTTTCGGAAGGACCAGTGTCTTTACTTTCGGGATTGAACCCTCGTCCCTTGATCTTGGTTCTCCATTTCTTTGCTGTTGCGATATATGGTGTTGGCCGTTTACTTCTACCATTTCCTTCACCTAAACGCATATGGGCAGGAGTCCGATTAATCGCAAGTGCATCAGGAATCATTTTGCCAATAATTAAGGCAGAAGGAGTTCGTCAGATGTTTTTCCCAGCCACTGTTCCAGCTTATTACAGAACTGCCCCGACTGCATAG 1305 0.4751 MLVEMVDPYVFGWIIFSILSLFTLNTMVFAGNKDATTAMTPRAENVTTATGEGRSSNRNGDADVIIVGAGVAGAALAHTLGKDGRRVLVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVENIDAQQVYGYALFKDGKHARLSYPLEKYHSDTAGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEEKATIKGVQYKSKDGQELSAFAPLTIVCDGCFSNLRRTLCNPQVDVPSCFVGLVLENCELPCANHGHVILGDPSPVLFYPISSTEVRCLVDVPGQKVPSISNGEMAKYLKTVIAPQPVASTINTLAGALYKVFCASPDPARKDMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLILVLHFFAVAIYGVGRLLLPFPSPKRIWAGVRLIASASGIILPIIKAEGVRQMFFPATVPAYYRTAPTA* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2010 434 SUPERFAMILY FAD/NAD(P)-binding domain 62 401 IPR036188 -
Dod09g2010 434 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 63 85 - -
Dod09g2010 434 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 212 227 - -
Dod09g2010 434 Gene3D - 54 248 IPR036188 -
Dod09g2010 434 PANTHER SQUALENE MONOOXYGENASE-RELATED 307 433 - -
Dod09g2010 434 PANTHER SQUALENE MONOOXYGENASE-RELATED 5 307 - -
Dod09g2010 434 Pfam NAD(P)-binding Rossmann-like domain 66 92 - -
Dod09g2010 434 Pfam Squalene epoxidase 212 307 IPR013698 GO:0004506|GO:0016021|GO:0050660
Dod09g2010 434 Pfam Squalene epoxidase 308 393 IPR013698 GO:0004506|GO:0016021|GO:0050660
Dod09g2010 434 PANTHER SQUALENE MONOOXYGENASE 5 307 IPR040125 GO:0004506|GO:0016126
Dod09g2010 434 PANTHER SQUALENE MONOOXYGENASE 307 433 IPR040125 GO:0004506|GO:0016126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2010 Dod-Chr9 41622010 41626849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2010 291 433 Miscellaneous Gene Families AT1G58440 71.034 4.19e-63 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2010 K00511 - cit:102622002 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1971 08 46722287 46727063 Dod09g2010 09 41622010 41626849 PCT