Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1999 ATGCCTGATCGGGTTATATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACCTGCTTATACAATCAGTAGAGATCACCTGCTCCTATCCAAATGGCAACGAATCTCATACAACAAACACATTATGTGTTCCCGCTGAAGATGACAACATCATACTAAACCCACAATTTGATGATGGCCTGAATAATTGGTCTGGAAGAGGCTGCAAGATTGCACTACATGATTCCATGGGGAACGGGAAAATCCTTCCAAAGATTGGGAAATTCTTTGCATCTGCAACAGAACGCACCCAAAGCTGGAATGGAATTCAGCAGGAGATCACTGGACGAGTGCAGCGCAAGCTTGCCTATGAGGTCACTGCTTTAGTTCGGATATTTGGGAACAATGTCACTTCTTCTAATGTGCGGGCTACTTTGTGGGTTCAAACACCAGATCTTCGAGAGCAATACATAGGGATTGCCAATGTGCAGGCAACAGATCAGGATTGGGCTCAAATGCAGGGAAAGTTCCTTCTAAATGGTTCACCTTCAAAAGTGGTTGTTTATTTAGAAGGTCCCCCTCCTGGCGTTGACATTCTTGTCAATACTTTGGTTGTAAAACATGCTGCTAAAACACCTCCTTCAACACCGCCAGATTTTGAGGATGCTCCTTTTGGGATTAATATAATTGAGAATAGTAATCTGGCTAATGGCACAAACGGGTGGTTTCCCCTTGGTAACTGTACTTTGAGTGTTGGAACTGGTTCGCCACGAGTACTTCCACCAATGGCAAGAGACTCCCTTGGGCCTCATGAATCCTTAAGCGGGCGCTACATCCTTGTAACCAATCGCACACAAACATGGATGGGTCCTGCTCAGATGATCACTGAGAAATTGGAACTCTTTTTAACTTACCAAGTATCTGCTTGGGTCCGGATTGGTTCAGGATCAGCTGGGCCTCAGAATGTGAATGTTGCCCTTAGTGTTGACAACCAGTGGGTCAACGGAGGACAAGCTGAGCTCGCTGATGACAGATGGCATGAAATTGGTGGGTCCTTTAGAATTGAGAAGCAGCCATCAAAGGTTATGGTTTATATTCAAGGTCCTGCTTCTGGTATTGACTTAATGGTTGCTGGACTTCAAATTTTTCCTGTCGATAGACGGGCAAGGTTTAGATATTTAAGGAGGCAGACAGACAAGCTCCGTAAGCGTGATGTTATCCTGAAGTTCTCTGGGATTGACTCAAGTGGTCTAGGAACCTTGGTGAAAGTTAGGCAACTACAAAACGATTTTCCGATTGGATCATGCATCAATAGGACAAATATTGACAATGAAGATTTTGTTGACTTCTTTGTGAAACATTTTAACTGGGCTGTGTTTGGGAATGAGCTGAAGTGGTATTGGACTCAGCCACAACAAGGGAATCTCAACTACAAGGATGCTGATGATATGTTAGACTTATGTCAGAAGAACAATATAAGCACCCGTGGTCATTGTATCTTCTGGGAAGTGGATGGCACTGTTCAGCAATGGGTCAAATCACTGAATAAAGATGATTTGATGAAAGCAGTCCAAAATCGCTTAACTAGCCTGTTGACTCGCTATAAGGGCAAGTTTAGGCACTATGATGTTAATAATGAAATGTTGCATGGCTCATTTTATCAAGATAGGCTTGGCAAGGATATCAGGGCAAACATGTTCAAAACTGCACACCAACTAGATCCATCAGCTACCCTCTTTGTGAATGATTATCATATTGAAGATGGAAGTGACACAAGATCATCTCCAGAAAAATACATTCAACAGATTCTTGATTTGCAACATCAAGGTGCCCCCGTTGGTGGGATTGGTATTCAAGGTCACATAGACAGTCCTGTGGGGCCAATTGTTTGTTCTGCCCTTGATAAATTGGGCACCCTTGGTCTACCAATCTGGTTCACTGAGCTTGATGTGTCTTCAACTAATGAATATGTCAGAGCTGATGATTTGGAAGTTATGCTAAGGGAAGCCATGGCACACTCTGCAGTAGATGGCATAATGCTGTGGGGATTTTGGGAACTGTTTATGAGCCGGGAAAATTCACACTTGGTGAATGCAGAAGGTGATCTTAACGAAGCTGGGCAAAGATTGCTTTGTCTTAAACAAGAGTGGCTGTCTCACAGCCATGGTCATGTTGATGAGGAAGGGCTATTCAGCTTCAGAGGCTTCAGTGGAACATACAACGTGGAAGTTGTGACCTTATCTAAGATAGTTTCTAAGACATTTGTTTTTGACAAGGGTGACGAGCCATTGGAGGTATCAATTGACTTATAA 2289 0.4334 MPDRVIFYLEGPAPGVDLLIQSVEITCSYPNGNESHTTNTLCVPAEDDNIILNPQFDDGLNNWSGRGCKIALHDSMGNGKILPKIGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVRIFGNNVTSSNVRATLWVQTPDLREQYIGIANVQATDQDWAQMQGKFLLNGSPSKVVVYLEGPPPGVDILVNTLVVKHAAKTPPSTPPDFEDAPFGINIIENSNLANGTNGWFPLGNCTLSVGTGSPRVLPPMARDSLGPHESLSGRYILVTNRTQTWMGPAQMITEKLELFLTYQVSAWVRIGSGSAGPQNVNVALSVDNQWVNGGQAELADDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDLMVAGLQIFPVDRRARFRYLRRQTDKLRKRDVILKFSGIDSSGLGTLVKVRQLQNDFPIGSCINRTNIDNEDFVDFFVKHFNWAVFGNELKWYWTQPQQGNLNYKDADDMLDLCQKNNISTRGHCIFWEVDGTVQQWVKSLNKDDLMKAVQNRLTSLLTRYKGKFRHYDVNNEMLHGSFYQDRLGKDIRANMFKTAHQLDPSATLFVNDYHIEDGSDTRSSPEKYIQQILDLQHQGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGLPIWFTELDVSSTNEYVRADDLEVMLREAMAHSAVDGIMLWGFWELFMSRENSHLVNAEGDLNEAGQRLLCLKQEWLSHSHGHVDEEGLFSFRGFSGTYNVEVVTLSKIVSKTFVFDKGDEPLEVSIDL* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1999 762 Pfam Glycosyl hydrolase family 10 419 676 IPR001000 GO:0004553|GO:0005975
Dod09g1999 762 Pfam Carbohydrate binding domain 220 363 IPR003305 GO:0016798
Dod09g1999 762 Pfam Carbohydrate binding domain 48 185 IPR003305 GO:0016798
Dod09g1999 762 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 407 705 IPR001000 GO:0004553|GO:0005975
Dod09g1999 762 SMART glyco_10 456 706 IPR001000 GO:0004553|GO:0005975
Dod09g1999 762 SUPERFAMILY (Trans)glycosidases 414 713 IPR017853 -
Dod09g1999 762 Coils Coil 688 708 - -
Dod09g1999 762 Gene3D - 43 201 - -
Dod09g1999 762 Gene3D - 217 375 - -
Dod09g1999 762 PANTHER GLYCOSYL HYDROLASE 39 762 IPR044846 GO:0004553|GO:0005975
Dod09g1999 762 PRINTS Glycosyl hydrolase family 10 signature 601 613 IPR001000 GO:0004553|GO:0005975
Dod09g1999 762 PRINTS Glycosyl hydrolase family 10 signature 569 580 IPR001000 GO:0004553|GO:0005975
Dod09g1999 762 PRINTS Glycosyl hydrolase family 10 signature 487 499 IPR001000 GO:0004553|GO:0005975
Dod09g1999 762 SUPERFAMILY Galactose-binding domain-like 47 201 IPR008979 -
Dod09g1999 762 Gene3D Glycosidases 410 714 - -
Dod09g1999 762 SUPERFAMILY Galactose-binding domain-like 218 378 IPR008979 -
Dod09g1999 762 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 633 643 IPR031158 -
Dod09g1999 762 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 39 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1999 Dod-Chr9 41451282 41455035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1999 1 762 Glycoside Hydrolase AT1G58370 72.288 0.0 1178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1999 - - gmx:100801147 1340.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1963 08 46531850 46537807 Dod09g1999 09 41451282 41455035 PCT