Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1992 ATGGGGGAGCTCTACAGGATCAGCTCGATCGACTGGAGACCCTCTCCGGTGACTGCCCTCGCCACCAGCATCGACGGCCTTCGTGTCGCCGCCGCTCGCCAAGACGGTTCCCTGGAGCTCTGGCTAGTCTCTCCCGGCTCCATTGGCTGGCACTGCCAACTCACGATTCATGGAGACCCTAGAACAAGAGTATCTTCACTTGTTTGGTGTGCCAGCGGCGGCTCTAATGGTGTTGGTCGCTTGTTTTCGTCTAACATTGATGGCTCCGTTTCCAAGTGGGATCTTTTCCACTTGAAGCAGAAGACTGTGCTTGAATCAGATGGTGTGTCAATCTGGCAAATGGCTGTGACGTTCCCTAAGGGTGATGCAATAAATGCTGAGCCTAATGGTGATCATATGGGGAATGGATATGTGAGGGGATTTAATGATTCGGATGAACTTGAGAGCAGTGAAAGTGATGAAGATTATGACTCGCCAGCTACCAGCAAGCAATCTGTTCTTGAATCTCCACGTGTGGCAATTGGTTATGATGATGGATGTGTGAAAATTTATGCCATATCTGATGCAGATGAATTCATATATGTAAAATCACTGCCTCGGGTCAGAGGACGAGTTTTAAGTGTGACTTGGAGTGCTGATGCCAAATACATATATTCAGGAAGCAGTGACGGGATAATACGATCCTGGGATGCCACATCTGGTCACGAAATCTATAGGATTACAGCTGGACATGGAGGTTTGGGCAGTGGACATGAACTTTGCATATGGTCATTACTGTCCTTAAGATCTGGGACACTTGTCAGTGCGGACAGCAGTGGCAGTGTTCAATTTTGGGACTGCCAACATGGAACTCTCTTGCAAACACATTCATTGCACAAGGGTGATGTAAATGCTTTGGCTGCAGCCCCAAGTCACGATAGGGTTTTCTCTGCTGGTTCTGATGGGCAGGTTATTCTTTATAAGCTCTCTAGTCAGTCAGTGACATCTGACAGTATCAGCTCCCCCACAACGATGAAGAAATGGATCTATGTTCAGTATGTGAGGGCTCATACACATGATGTTAGGGCGTTGACTGTTGCTGTGCCCATAAGTCAAGAAGATTCTTTGCCAGATGAGAGGATTAAAAGACCTCGGGGTGAATCAAAGCCCATTGATTTTAGTTACCATAAGTGGGCCCAATTGGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACAAAACTCTTTGCATACCCTGTAAAGGAATTCACCAAGTTTTCTCCTCATGATATCTGTCCTGCACCTCAGAGGACACCAATTCAACTGGTGCTTAATACCAACTTCAATCAATCGTCAATGCTTTTAGTCCAGTCCCCACAATGGCTAGATGTTCATTTACTACAACTCAGAAATGTCCGCACAGCTGGTGGTTTTGCAAAGACTGAAATCCTTGCCCGAGTAAAGAGTAAGGAATCTCGAAAGATTATTTGCAGTGCCATTTCTAATTCAGGGGCGTTTTTTGCATACTCTGATCATTCAAAGCCTAGTCTTTTTGAGTTAAAGAGGTCTGAAGTTGGAAAGGTCACATGGAGTGTCAGTCGAAAGAAACTTCCCCAGCGATTACCATTTGCCCATTCAATGATTTTCACTCATGACTCGTCATGGTTGATACTAGCTGGGCATGATAGGAGGATATATGTTGTGGATGTCAGCAGCTCGGAGCCAGTGCATACTTTTACACCGTGTCGGGACCTGAGTGATGAGAATTTACCTCCAACTGAGCCTCCCATAACAAGATTGTTTACCAGTTCAGACAGGCAGTGGTTGGCAGCTGTGAACTGCTTTGGCGATATATATGTATTTAACTTGGAGACACTAAGGCAGCACTGGTTTATTTCAAGATTAGATGGTGCCTCCGTTACAGCTGGAGGGTTTCCACCCCAGAACAACAATGTAATGGTAGTTACCACTTCCTCAAACCAAGTGTATGCGTTTGATGTAGAGGCCAAGCAGTTGGGAGAATGGTCAATGCGGCACACATTTGTTCTTCCCAGGAGATACCAGGAATTTCCTGGTGAAGTTATTGGGCTTTCATTTCCACCCTCGTCAACTTCATCTTCAGTTGTTGTTTACAGTTCCAGGGCAATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGATGATAGTGATTTGCTAAGTACTCAAGATTCACTGGCCAGGAATTTACAAAACTTTAATGTTAAGAAGAGGACTAAATATAGGAAAAACTTCGAAGTGTTGCCGTTAGATAACCCAGTTTTATTCTTAGCTCATGTTTCAAAAAATTCCTTCTTTATGATAGACAAACCTTGGTTGGAAGTGATCAAAAAATTAGAAGCCCCACCAGTCCACAGACATATTTTTGGTTCCTAG 2394 0.4503 MGELYRISSIDWRPSPVTALATSIDGLRVAAARQDGSLELWLVSPGSIGWHCQLTIHGDPRTRVSSLVWCASGGSNGVGRLFSSNIDGSVSKWDLFHLKQKTVLESDGVSIWQMAVTFPKGDAINAEPNGDHMGNGYVRGFNDSDELESSESDEDYDSPATSKQSVLESPRVAIGYDDGCVKIYAISDADEFIYVKSLPRVRGRVLSVTWSADAKYIYSGSSDGIIRSWDATSGHEIYRITAGHGGLGSGHELCIWSLLSLRSGTLVSADSSGSVQFWDCQHGTLLQTHSLHKGDVNALAAAPSHDRVFSAGSDGQVILYKLSSQSVTSDSISSPTTMKKWIYVQYVRAHTHDVRALTVAVPISQEDSLPDERIKRPRGESKPIDFSYHKWAQLGVPMLISAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPIQLVLNTNFNQSSMLLVQSPQWLDVHLLQLRNVRTAGGFAKTEILARVKSKESRKIICSAISNSGAFFAYSDHSKPSLFELKRSEVGKVTWSVSRKKLPQRLPFAHSMIFTHDSSWLILAGHDRRIYVVDVSSSEPVHTFTPCRDLSDENLPPTEPPITRLFTSSDRQWLAAVNCFGDIYVFNLETLRQHWFISRLDGASVTAGGFPPQNNNVMVVTTSSNQVYAFDVEAKQLGEWSMRHTFVLPRRYQEFPGEVIGLSFPPSSTSSSVVVYSSRAMCLIDFGLPVEQDDSDLLSTQDSLARNLQNFNVKKRTKYRKNFEVLPLDNPVLFLAHVSKNSFFMIDKPWLEVIKKLEAPPVHRHIFGS* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1992 797 ProSiteProfiles Trp-Asp (WD) repeats profile. 198 239 IPR001680 GO:0005515
Dod08g1992 797 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 796 IPR044622 GO:0010073|GO:0035266
Dod08g1992 797 ProSiteProfiles Trp-Asp (WD) repeats profile. 289 330 IPR001680 GO:0005515
Dod08g1992 797 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 14 620 IPR011047 -
Dod08g1992 797 MobiDBLite consensus disorder prediction 143 164 - -
Dod08g1992 797 Gene3D - 4 133 IPR015943 GO:0005515
Dod08g1992 797 SUPERFAMILY Nucleoporin domain 583 706 - -
Dod08g1992 797 Gene3D - 460 709 IPR015943 GO:0005515
Dod08g1992 797 ProSitePatterns Trp-Asp (WD) repeats signature. 217 231 IPR019775 -
Dod08g1992 797 SMART WD40_4 3 42 IPR001680 GO:0005515
Dod08g1992 797 SMART WD40_4 233 279 IPR001680 GO:0005515
Dod08g1992 797 SMART WD40_4 527 562 IPR001680 GO:0005515
Dod08g1992 797 SMART WD40_4 49 94 IPR001680 GO:0005515
Dod08g1992 797 SMART WD40_4 282 321 IPR001680 GO:0005515
Dod08g1992 797 SMART WD40_4 191 230 IPR001680 GO:0005515
Dod08g1992 797 Pfam WD domain, G-beta repeat 205 230 IPR001680 GO:0005515
Dod08g1992 797 Gene3D - 263 427 IPR015943 GO:0005515
Dod08g1992 797 Gene3D - 134 262 IPR015943 GO:0005515
Dod08g1992 797 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 198 234 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1992 K14548 - gmx:100797494 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1992 08 47056891 47063408 Dod08g1992 08 47056891 47063408 ECH