Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1991 ATGGCTGGGAGGAAGAAAGAAGAAGGAAATATATTATTTAAAGGTGGCAAGTATCAGCAAGCAGCAAAGAAGTATGACAAGGCTGCTGATTTTGTTAGTGAAGATGGATCCTTCGGGGATGATGAGCAAAAGCTAGCCAAGGCACTAAGAGTGTCATGCTGGTTGAATGGTGCAGCTTGTTGCCTTAAACTTAATGACTTCCCTGGAGCAATCAAGTTATGTTCACAGGTGCTTGATGTTGAGTTTTACAATGTGAAAGCTTTGTACAGACGAGCGCAAGCATACATAGAGACTGGAGACCTCCTATTAGCAGATGTAGACATCAAGAAAGCTCTCGAGGTGGACCCTCAAAACAGGGAGGTAATGGTAATTAAGAGGAAACTGAAACAACTTCAGGCTGAGAATAACAAGAAAGATGCCAAGCTCTATGAAAATATGTTTGCGGCGCGCAAAACAACGGACACGTCTGTGGCAACAAAGAGACTGAAGGTTGAGAAAGAAGAGGATGAGAGGAAAAATGAAGAGGCTGTGAGGGTGGAAATGGACAAAGTTGCTGATAGTGCAGCTCCTCCTGAAGGCGATTTAATTGTGGATTCATGTTGA 603 0.4328 MAGRKKEEGNILFKGGKYQQAAKKYDKAADFVSEDGSFGDDEQKLAKALRVSCWLNGAACCLKLNDFPGAIKLCSQVLDVEFYNVKALYRRAQAYIETGDLLLADVDIKKALEVDPQNREVMVIKRKLKQLQAENNKKDAKLYENMFAARKTTDTSVATKRLKVEKEEDERKNEEAVRVEMDKVADSAAPPEGDLIVDSC* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1991 200 PANTHER PEPTIDYLPROLYL ISOMERASE 1 171 - -
Dod08g1991 200 Pfam Tetratricopeptide repeat 86 118 IPR019734 GO:0005515
Dod08g1991 200 ProSiteProfiles TPR repeat profile. 85 118 IPR019734 GO:0005515
Dod08g1991 200 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 171 - -
Dod08g1991 200 MobiDBLite consensus disorder prediction 163 187 - -
Dod08g1991 200 SUPERFAMILY TPR-like 6 147 IPR011990 GO:0005515
Dod08g1991 200 MobiDBLite consensus disorder prediction 163 200 - -
Dod08g1991 200 Coils Coil 121 141 - -
Dod08g1991 200 Gene3D Tetratricopeptide repeat domain 1 145 IPR011990 GO:0005515
Dod08g1991 200 SMART tpr_5 2 35 IPR019734 GO:0005515
Dod08g1991 200 SMART tpr_5 51 84 IPR019734 GO:0005515
Dod08g1991 200 SMART tpr_5 85 118 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1991 2 148 Calmodulin-binding Proteins AT3G25230 59.864 3.48e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1991 K09571 - gmx:100798382 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1991 08 47036963 47039012 Dod08g1991 08 47036963 47039012 ECH