Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1985 ATGTTTGAAGAAGAAGCGGTCCAATTTTCATGTCACGAAACCATGTTCACACCAAGTGAACTAGAGGAGCTGTTTTCCCTCATTAACCAACCGGGTCTTTTCGACCCAGAAAGCCTGAGTTCCGGTTCGCATGGATCGAACCGGGCGGTTTACTCAACCCACCAGAGAAGACTGAGGCGCATGCAATCGAACCGGGAATCAGCCAGACGGTCCAGATGGAGAAAGAAGAGGCATTTGGAGAACATCACGAATCAAGTGAACCGGTTAAAAATCGAAAACCAAGAATTGAAAAACCGGCTCGGCTTGACCATGCACCACAACCTCCTACTTTCTTTTGAGAATGAGCATCTAAGATCCGAATCCTTGGCCCTTGCGGCCAAACTCTCGAATCTATATCGGATCTTAGGCGCAAAGCTTTTATAA 423 0.4728 MFEEEAVQFSCHETMFTPSELEELFSLINQPGLFDPESLSSGSHGSNRAVYSTHQRRLRRMQSNRESARRSRWRKKRHLENITNQVNRLKIENQELKNRLGLTMHHNLLLSFENEHLRSESLALAAKLSNLYRILGAKLL* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1985 140 SMART brlzneu 52 116 IPR004827 GO:0003700|GO:0006355
Dod08g1985 140 Coils Coil 136 140 - -
Dod08g1985 140 MobiDBLite consensus disorder prediction 37 52 - -
Dod08g1985 140 Pfam bZIP transcription factor 56 102 IPR004827 GO:0003700|GO:0006355
Dod08g1985 140 MobiDBLite consensus disorder prediction 37 74 - -
Dod08g1985 140 PANTHER BZIP TRANSCRIPTION FACTOR 44 32 139 - -
Dod08g1985 140 Coils Coil 79 99 - -
Dod08g1985 140 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 59 74 IPR004827 GO:0003700|GO:0006355
Dod08g1985 140 Coils Coil 51 71 - -
Dod08g1985 140 SUPERFAMILY Leucine zipper domain 56 110 IPR046347 GO:0003700|GO:0006355
Dod08g1985 140 CDD bZIP_plant_GBF1 57 106 IPR045314 GO:0003700|GO:0006355
Dod08g1985 140 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 54 100 IPR004827 GO:0003700|GO:0006355
Dod08g1985 140 PANTHER BZIP TRANSCRIPTION FACTOR 32 139 - -
Dod08g1985 140 Gene3D - 54 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1985 Dod-Chr8 46973727 46974280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1985 13 135 bZIP Transcription Factor Family AT3G49760 40.769 1.26e-23 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod08g1985 bZIP_1 6.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1985 - - gmx:102668006 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1985 08 46973727 46974280 Dod09g2021 09 41741632 41742030 PCT