Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1980 ATGGCCAATAATTCTCAGCAACCCGGTATGCAGTTTCGGCCAGTCATTCAGGCTCAGCAAGGGCAACCATATGCTCCAATGGCTCCGCAACAATTTGGACCTGCAGGACATGCTATTCAGAGTCAGCAATTGCAGTATTCTCAACCAATGCAACAGTTGGCTCCAAGACCAATTCAGCCTGGTCACCCTCCACCTTCGTCACAGGCTATACCTATGCCATATATTCAGACAAACAGGCCACTGGCATCTGTTCCACCACATTCACAGCAAACTGTTCCCCACTTAAGCAATCATATGCCTGGCTTGGCTGTTTCTGGAGCAACTCCTCATTCTTCATACCCTTTTGTACCATCTTATGGTCAGCAGCAAGATAATGTTAATGCAATGACACAATACCAGCCACCGGCACAAATGCTTGCTCCCCCTGCTGGACAACCTTGGTTGTCCTCTGTTTCTCAGAGTGCTGCAACTGTTGCACCAGTGCTGCAGCCTGGAGTACAATCATCTGGTGCTACATCAACTGATGCTGCAACAAATGCCCCCAACCAGCACTCCTTATCTGATTGGCAAGAGCATACTTCTGCTGATGGAAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCATTGGAATTGATGTCACCTATTGAGAGGGCCGATGCATCAACTGTTTGGAAAGAGTTCACTTCTTCAGAAGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCAACATGGTCAATGCCAGAGGAACTCAAGTTGGCTCGTGAACAGGCACACAAAGCTGTTAACCAGGGAGTGCAGTCAGAAACAAGTGATACATCCAATGCTGCTGTCACATCTGCTGCAACATCAACGCCTGCTAATGCTGCTAGCTCAAACACTCCTTCGTCATCGAATGGGCTTGCTTCAAGTCCAGCTTCCGTCACACCAGTTGCATCAACTGATCCTCAACAGTTGGTTTCTGGATTATCGAGTACCACTGGGGTTGAATTGAGTACTGTGGTAACCACGACCACTGCATCTACAGCAGTTGCTGGACCTGCAAATTCACTTAATTCCACAGTGCCATCCATCGTTGAAAATCAAGTATCTCAGGATGTTGCTACTTCTGTCAATAGAGCTTCTCTTCAAGATATTGAGGCATCCAAAAGGGGATTGCCAGTGGCTGGAAAAACGAATGTGACTCTGCCTGAGGAGAAAGCCAATGATGATGATAACTTCATATATGCAAACAAGACAGAAGCAAAAGTTGCATTTAAAGCGCTCTTGGAGTCTGCAAATGTTCAGTCTGATTGGACATGGGAACAGGCAATGAGAGAAATAATCAATGACAAGAGATATAATGCTCTAAAAACACTTGGTGAGCGGAAACAAGCTTTTAATGAGTATTTGGGCCAAAGAAAGAAGCTAGAGGCTGAAGAGCGACGCATGAAACAGAAAAAAGCTCGGGAAGAATTCACAAAGATGTTAGAAGAATGCAAGGAATTGACTTCATCCACAAGATGGAGCAAAGCGATTAGTATGTTTGAAAATGATGAACGGTTCAATGCCGTTGAGAAATCGAGAGACCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAAATGCTGCTGAGGAACACAGGCGGAATGTAGCAGAATACAGGAAATTTCTGGAGTCCTGTGATTATATTAAGGTGTACAGTCCATGGCGAAAGGTCCAAGATCGGTTAGAGGATGATGATAGATTCTTACGACTAGAAAAAATCGACCGCCTGCTGGTTTTCCAGGACTATATTCGTGATTTGGAGAAGGAAGAAGAGGAACACAAAAGAATACAGAAGGAGCGACTTCGTCGAGGTGAAAGGAAAAATCGTGATGCATTTCGCAAGTTGCTGGAAGAACATGTTTCTGCCGGAATTGTAACTGCTAAAACTCAATGGCGAGAATATTGCATGAAGGTAAGAGATTTGCCTCAATATCAAGCTGTTGCGTCAAACACTTCTGGTTCTACTCCTAAAGATCTATTTGAGGATGTAGCAGAAGATCTTGAAAACCAGTATCATGAAGACAAGACACTCATAAAAGATACAATTAAGTCAGGCAAGATCACTGTAGTGTCCACATCGGTGTTTGAAGACTTTAAGGCTGCTATCTTGGAAGAAGTTAGTTGCCAAACAATATCAGAGATCAATTTGAAGCTTATATTCGAAGAGTTCTTAGAGAGAGCCAAGGAGAAGGAGGAGAAAGAAGCTAAGAAGCGCCAACGCCTTGCTGATGACTTCACTAACCTGTTATACACATTGAAGGATATTACTACTACTTCAAATTGGGAGGATTGCAAACCACTTTTTGAAGAGACACAAGAGTACAGGTCGATTGGGGATGAAAACTACAGTAGAGAAATATTTGAGGAATACATTACGTACTTAAAGGAAAAAGCTAAAGAGAAGGAACGCAAACGGGAAGAGGAAAAGGCCAAAAAGGAGAAAGAAAGAGAAGAGAAAGAGAAACGGAAGGAGAAGGAGAAAAAGGAGAAGGATAGAGAACGTGAGAAAGAGAAGTCTAAGGAACGACATAAGAAGGATGACACAGATAGTGAAAATCAAGATACTGAAAGCCATGCTTACAAGGAGGAGAAGAAAAAAGATAAGGAACGGAAACATAGGAAGAGGCGTCATAGCAGCGTAGAGGATGTGGATTCTGAGAAAGACGAGAAGGAAGAGTCCAAGAAATCGCGAAGACATGGCAGTGACCGCAAGAAGTCTAGGAAGCATGCAAACTCTCCTGATTCAGACAATGAAAGCCGTCATAGAAGACATAAGAGGGAGCACCGCGATGGTTCCAGGAAAACTGGCGGGCATGAGGAACTTGAAGATGGGGAACTCGGTGACGATGCGGACATTTAG 2928 0.4365 MANNSQQPGMQFRPVIQAQQGQPYAPMAPQQFGPAGHAIQSQQLQYSQPMQQLAPRPIQPGHPPPSSQAIPMPYIQTNRPLASVPPHSQQTVPHLSNHMPGLAVSGATPHSSYPFVPSYGQQQDNVNAMTQYQPPAQMLAPPAGQPWLSSVSQSAATVAPVLQPGVQSSGATSTDAATNAPNQHSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSEGRKYYYNKVTQQSTWSMPEELKLAREQAHKAVNQGVQSETSDTSNAAVTSAATSTPANAASSNTPSSSNGLASSPASVTPVASTDPQQLVSGLSSTTGVELSTVVTTTTASTAVAGPANSLNSTVPSIVENQVSQDVATSVNRASLQDIEASKRGLPVAGKTNVTLPEEKANDDDNFIYANKTEAKVAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSTRWSKAISMFENDERFNAVEKSRDREDLFESYMVELERKEKENAAEEHRRNVAEYRKFLESCDYIKVYSPWRKVQDRLEDDDRFLRLEKIDRLLVFQDYIRDLEKEEEEHKRIQKERLRRGERKNRDAFRKLLEEHVSAGIVTAKTQWREYCMKVRDLPQYQAVASNTSGSTPKDLFEDVAEDLENQYHEDKTLIKDTIKSGKITVVSTSVFEDFKAAILEEVSCQTISEINLKLIFEEFLERAKEKEEKEAKKRQRLADDFTNLLYTLKDITTTSNWEDCKPLFEETQEYRSIGDENYSREIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEKRKEKEKKEKDREREKEKSKERHKKDDTDSENQDTESHAYKEEKKKDKERKHRKRRHSSVEDVDSEKDEKEESKKSRRHGSDRKKSRKHANSPDSDNESRHRRHKREHRDGSRKTGGHEELEDGELGDDADI* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1980 975 MobiDBLite consensus disorder prediction 824 889 - -
Dod08g1980 975 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 9 970 IPR039726 GO:0045292
Dod08g1980 975 SUPERFAMILY FF domain 762 823 IPR036517 -
Dod08g1980 975 Pfam WW domain 187 214 IPR001202 GO:0005515
Dod08g1980 975 Pfam WW domain 230 255 IPR001202 GO:0005515
Dod08g1980 975 Coils Coil 743 767 - -
Dod08g1980 975 SUPERFAMILY FF domain 480 548 IPR036517 -
Dod08g1980 975 Coils Coil 535 564 - -
Dod08g1980 975 Gene3D FF domain 549 618 IPR036517 -
Dod08g1980 975 Gene3D FF domain 619 700 IPR036517 -
Dod08g1980 975 Gene3D FF domain 475 548 IPR036517 -
Dod08g1980 975 MobiDBLite consensus disorder prediction 930 946 - -
Dod08g1980 975 SMART ww_5 184 216 IPR001202 GO:0005515
Dod08g1980 975 SMART ww_5 225 257 IPR001202 GO:0005515
Dod08g1980 975 CDD WW 230 257 IPR001202 GO:0005515
Dod08g1980 975 ProSitePatterns WW/rsp5/WWP domain signature. 230 255 IPR001202 GO:0005515
Dod08g1980 975 Coils Coil 602 622 - -
Dod08g1980 975 SUPERFAMILY WW domain 217 258 IPR036020 GO:0005515
Dod08g1980 975 SUPERFAMILY WW domain 188 222 IPR036020 GO:0005515
Dod08g1980 975 MobiDBLite consensus disorder prediction 166 192 - -
Dod08g1980 975 MobiDBLite consensus disorder prediction 1 26 - -
Dod08g1980 975 Coils Coil 467 490 - -
Dod08g1980 975 ProSiteProfiles WW/rsp5/WWP domain profile. 187 216 IPR001202 GO:0005515
Dod08g1980 975 SMART FF_2 419 473 IPR002713 -
Dod08g1980 975 SMART FF_2 486 541 IPR002713 -
Dod08g1980 975 SMART FF_2 554 608 IPR002713 -
Dod08g1980 975 SMART FF_2 628 689 IPR002713 -
Dod08g1980 975 SMART FF_2 761 816 IPR002713 -
Dod08g1980 975 Coils Coil 814 866 - -
Dod08g1980 975 ProSitePatterns WW/rsp5/WWP domain signature. 189 214 IPR001202 GO:0005515
Dod08g1980 975 ProSiteProfiles WW/rsp5/WWP domain profile. 224 257 IPR001202 GO:0005515
Dod08g1980 975 MobiDBLite consensus disorder prediction 268 333 - -
Dod08g1980 975 Pfam FF domain 558 605 IPR002713 -
Dod08g1980 975 Pfam FF domain 630 685 IPR002713 -
Dod08g1980 975 Pfam FF domain 421 470 IPR002713 -
Dod08g1980 975 Pfam FF domain 766 813 IPR002713 -
Dod08g1980 975 Pfam FF domain 488 538 IPR002713 -
Dod08g1980 975 Gene3D FF domain 755 829 IPR036517 -
Dod08g1980 975 ProSiteProfiles FF domain profile. 554 608 IPR002713 -
Dod08g1980 975 ProSiteProfiles FF domain profile. 419 473 IPR002713 -
Dod08g1980 975 CDD WW 187 216 IPR001202 GO:0005515
Dod08g1980 975 SUPERFAMILY FF domain 621 696 IPR036517 -
Dod08g1980 975 MobiDBLite consensus disorder prediction 264 333 - -
Dod08g1980 975 SUPERFAMILY FF domain 411 473 IPR036517 -
Dod08g1980 975 SUPERFAMILY FF domain 546 615 IPR036517 -
Dod08g1980 975 Gene3D FF domain 419 474 IPR036517 -
Dod08g1980 975 MobiDBLite consensus disorder prediction 1 50 - -
Dod08g1980 975 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 9 970 - -
Dod08g1980 975 ProSiteProfiles FF domain profile. 486 541 IPR002713 -
Dod08g1980 975 Gene3D - 227 268 - -
Dod08g1980 975 Gene3D - 183 226 - -
Dod08g1980 975 MobiDBLite consensus disorder prediction 35 50 - -
Dod08g1980 975 MobiDBLite consensus disorder prediction 899 921 - -
Dod08g1980 975 MobiDBLite consensus disorder prediction 824 975 - -
Dod08g1980 975 MobiDBLite consensus disorder prediction 166 190 - -
Dod08g1980 975 ProSiteProfiles FF domain profile. 626 689 IPR002713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1980 Dod-Chr8 46911166 46925105 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1980 K12821 - gmx:100806019 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1980 08 46911166 46925105 Dod08g1980 08 46911166 46925105 ECH