Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1963 ATGGGAGACGGGAAAATTCTACCACAGTCTGGCAAGTTCTTCGCATCTGCAACAGAGCGCACACAAAGCTGGAATGGAATTCAGCAGGAGATCACTGGAAGAGTGCAGCGCAAGCTTGCCTATGAGATCGCTGCTTTGGTACGAATATTTGGAAGCAATGTCACTACTGCTGATGTTCGGGCTACTTTGTGGGTTCAAACACCAGATCTTCGAGAGCAGTACATAGGCATTGCTAATGTGCAGGCAACAGATAAGGATTGGGTTAATATGCAGGGAAAATTCCTTCTAAATGGCTCCCCATCAAAAGTGGTCCTTTATTTAGAAGGTCCCCCTGCAGGCATTGACATTCTTGTCAATACTTTGGTTGTAAAGCATGCGGCTAAAACGCCTCCTTCAACACCACCAGATGTGAAGGTTAAACTTTTGAAACAGCTTTTGATGTTGCTTTTGGGGCTTAATATAATTCAGAACAGCAGTTTAGCTGATGGAACCAATGGATGGTATCCCCTTGGTAATTGCACTTTGACTGTTAAAACTGGTTCACCGCATATAATTCCGCCGATGGCTAGAGACTCTCTTGGACCTCATGAACTCCTAAGTGGCCGATACATCCTTGTGACCAATCGCACGCAAACATGGATGGGTCCTGCTCAGACAATCACTGATAAATTGAAGCTCTTTGTGACTTATCAAGTATCTGCATGGGTACGGATTACTTCAGGATCAACTGGGCCACAGAATGTAAATGTTGCCCTTGGTGTTGACAACCAGTGGGTCAATGGAGGACAAACTGAGGTTTCTGATGACAGATGGCATGAAATTGGTGGGTCCTTTAGAATCGAAAAGCAGCCATCAAAGGTTATGGTTTATGTCCAAGGTCCTGTTTCTGGTGTAGACTTAATGGTTGCTGGACTTCAAATTTTCCCTGTTGATAGACATGCAAGGTTTAGATATTTAAAGACACAGACAGACAAGATCCGTAAGCGGGATGTTATCCTTAAATTCTCTGGGCTGGACTCTAGCAGCTATATGAAAACCTCAGTGCAAGTCAGACAAACACAGAATGATTTTCCAGTTGGATCATGTATCAGTAGAACAAATATTGACAACGAAGATTTTGTGAAGTTCTTTGTGAAACATTTTAACTGGGCTGTGTTTGGGAATGAGTTGAAGTGGTATTGGACTGAGCCACAACAAGGGAATCTCAATTACAAGGATGCTGATGATCTCTTAAGCTTGTGTCAGAAGAACAAGATAGAAACTCGAGGTCACTGTATCTTCTGGGAAGTGGATGGTGTTGTTCAGCAATGGGTTAAATCACTGAACAAAAATGACTTGATGACGGCTGTCCAAAACCGCTTAAACAGCCTGCTGACTCGCTACAAGGGAAAGTTCAGTCACTATGATGTTAATAATGAAATGCTGCATGGCTCATTTTACCAAGATAGGCTAGGCAAGGATATAAGGGCAAACATGTTCAAGACTGCAAACCAACTAGATCCATCTGCTATCCTTTTTGTGAATGATTATCATGTGGAAGATGGATGCGACACCAGATCATGTCCTGAAAAGTACATTCAACATATCCTTGATTTGCAAGAGCAAGGTGCCCCAGTTGGGGGAATTGGAGTTCAAGGTCACATAGACAGTCCAGTGGGGCCTGTTGTTTGTTCAGCCCTTGATAAATTGGGAATTCTTGGTCTACCAATATGGTTCACTGAGCTTGATGTGTCTTCCATTAATGAATATGTTAGAGCAGATGATATGGAAGTTATGCTGAGGGAAGCTATGGCTCACCCTGCTGTTGAAGGCATAATGCTGTGGGGATTTTGGGAGTTGTTCATGAGCAGGGAAAATTCACACTTGGTGAATGCGGAAGGTGACATCAATGAAGCTGGGAAAAGGTTCTTAGCTCTTCAACAAGAGTGGCTATCCCACAGCCATGGTCCTGTTGATGGGCAAGGTCAATACAACTTTAGAGGTTTTCATGGAACATACAATGTTGAAGTTGTGACTGATACAAAGAAAGTTACTAAGACATTTGTTCTTGACAAGGGTGACTCACCACTGGTGGTATCCATTAACTTCTAA 2091 0.4299 MGDGKILPQSGKFFASATERTQSWNGIQQEITGRVQRKLAYEIAALVRIFGSNVTTADVRATLWVQTPDLREQYIGIANVQATDKDWVNMQGKFLLNGSPSKVVLYLEGPPAGIDILVNTLVVKHAAKTPPSTPPDVKVKLLKQLLMLLLGLNIIQNSSLADGTNGWYPLGNCTLTVKTGSPHIIPPMARDSLGPHELLSGRYILVTNRTQTWMGPAQTITDKLKLFVTYQVSAWVRITSGSTGPQNVNVALGVDNQWVNGGQTEVSDDRWHEIGGSFRIEKQPSKVMVYVQGPVSGVDLMVAGLQIFPVDRHARFRYLKTQTDKIRKRDVILKFSGLDSSSYMKTSVQVRQTQNDFPVGSCISRTNIDNEDFVKFFVKHFNWAVFGNELKWYWTEPQQGNLNYKDADDLLSLCQKNKIETRGHCIFWEVDGVVQQWVKSLNKNDLMTAVQNRLNSLLTRYKGKFSHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDPSAILFVNDYHVEDGCDTRSCPEKYIQHILDLQEQGAPVGGIGVQGHIDSPVGPVVCSALDKLGILGLPIWFTELDVSSINEYVRADDMEVMLREAMAHPAVEGIMLWGFWELFMSRENSHLVNAEGDINEAGKRFLALQQEWLSHSHGPVDGQGQYNFRGFHGTYNVEVVTDTKKVTKTFVLDKGDSPLVVSINF* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1963 696 SMART glyco_10 390 640 IPR001000 GO:0004553|GO:0005975
Dod08g1963 696 PANTHER - 1 695 - -
Dod08g1963 696 PANTHER GLYCOSYL HYDROLASE 1 695 IPR044846 GO:0004553|GO:0005975
Dod08g1963 696 SUPERFAMILY (Trans)glycosidases 345 647 IPR017853 -
Dod08g1963 696 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 344 639 IPR001000 GO:0004553|GO:0005975
Dod08g1963 696 Gene3D - 6 126 - -
Dod08g1963 696 Gene3D - 151 308 - -
Dod08g1963 696 SUPERFAMILY Galactose-binding domain-like 7 126 IPR008979 -
Dod08g1963 696 SUPERFAMILY Galactose-binding domain-like 151 311 IPR008979 -
Dod08g1963 696 Pfam Carbohydrate binding domain 10 110 IPR003305 GO:0016798
Dod08g1963 696 Pfam Carbohydrate binding domain 153 294 IPR003305 GO:0016798
Dod08g1963 696 Pfam Glycosyl hydrolase family 10 353 610 IPR001000 GO:0004553|GO:0005975
Dod08g1963 696 Gene3D Glycosidases 343 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1963 Dod-Chr8 46531850 46537807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1963 1 696 Glycoside Hydrolase AT1G58370 72.636 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1963 - - gmx:100818319 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1963 08 46531850 46537807 Dod08g1963 08 46531850 46537807 ECH
Dod08g1963 08 46531850 46537807 Dod09g1999 09 41451282 41455035 PCT