Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1961 ATGGATTTCATGAAGGTCCTCGATCAAACCGTTCGCGAAATAAAAAGAGAGGTGAATCTGAAGGTGCTCAAGGTTCCCGAGATCGAACAGAAGGTGTTGGATGCAACCGATAATGAACCTTGGGGTCCTCATGGTTCTGCACTGGCAGAGATTGCGCAAGCTACCAAAAAATTCACTGAATGTCAAATGGTCATGAATGTCCTTTGGACTAGACTGACTGAAACAGGAAAGGATTGGCGTTACGTATACAAGGCATTAGCTGTTATAGATTATTTGGTATCACATGGATCTGAACGTGCAGTTGATGACATTATAGAACATACTTTTCAGATCTCAGCACTTTCTAGTTTTGAATATGTTGAGCCTAGTGGGAAGGATGTCGGACTCAATGTCAGGAAGAAGGCAGAAAACATTGTGGCCCTTTTGAATGATAGAGATAAGATACAAGAAGTCAGAAATAAAGCTGCTGCAAACCGTGACAAGTACGTTGGAGTTTCGTCTAGTGGAATCACATACAAATCTGGGTCAGCCACATTTAGTAGTGGCAGCTATCAGAGCAGTGATAAATATTCAGGCTTTGGTTCAAGAGATGGTGACAGGTTTAGCGATAGTTACAGAGACAAGGGGTACTATGAAGAAGAAAAAGTTGAGAAAGGTTACCCTGGAAAATCACGATATGGCAGTGACAATCAAGAGAACTCCTTCAAGAAGGGTTCTGCACGCTCTGTCAGCAAAAGTCAGGAGAATATGCCTTCCAGAGTATCAAAGTCATCTACTGCTAATGCCTATGATGCTTACAGTTCAGTTGCTTCTCAAAGTTCAAGTGCACCTGCAAACAATACTGAGGATGACTTTGATGATTTTGATCCAAGAGGAACTTTGACTAAGGTGTCAGCTGGAGGCTCTAACCAGGTCGATCTCTTTGGACAAGATTTACTTGGTGACCTCGTGGATGCCCCAACATCTGTTTCTACAGAAAAGCCTGCCACTAGTAGTGTGTCCGAGGTTGATCTATTTGCAGAAGCAGCATTTGTATCAGCTGCACCTTATGCAGACAAAGGGGCTAGTTCTCAACCTCAGGAAGAAGGGGATCTATTTGCATCACAACCAGCCATTCCTTCAGCTGCACCAACAGTTGACTTGTTTTCTGTTCCTGAACCAGTTGTGCAGCCAGCCAAGACAGGAAATTCTGGTCCTGTGAATAATAGCACCTTTGATCCCTTTGCTGCTATTCCACTTAATAATTTTGATGGATCTGATGCTTTTGGTGAATTTACTTCTCAATCTGATTCAGTATCACCACAGCCCTCAAATAATGTTGTCAGTGATGGCGGCCATGATAATATGAACGGTAAATCTTTAGCAGACTCTAAAGTTTCACCTAAAAAGGATGCATTCCAGGTGAAATCTGGCATTTGGGCTGATTCACTCAGCCGTGGACTGATTGATCTCAATATATCTGCCCCCAAAAAGGTAAATCTTGCAGATGTTGGAATTGTGGGTGGATTGAGTGATGGATCAGATGAAAAGGAAAAAGGCCCTCTGCCTTCATTTTACATGGGTAGAGCAATGGGTTCAGGATCTGGTCTTGGTAAATCTGCATTCACTCCATCACAGCCAGAAATTGGAGATGACTTCTTCTCAAGCCTTGGTAGTCAACAGTATCAATATGGTGGGTTCCAAAAGTAA 1689 0.4281 MDFMKVLDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSALAEIAQATKKFTECQMVMNVLWTRLTETGKDWRYVYKALAVIDYLVSHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVALLNDRDKIQEVRNKAAANRDKYVGVSSSGITYKSGSATFSSGSYQSSDKYSGFGSRDGDRFSDSYRDKGYYEEEKVEKGYPGKSRYGSDNQENSFKKGSARSVSKSQENMPSRVSKSSTANAYDAYSSVASQSSSAPANNTEDDFDDFDPRGTLTKVSAGGSNQVDLFGQDLLGDLVDAPTSVSTEKPATSSVSEVDLFAEAAFVSAAPYADKGASSQPQEEGDLFASQPAIPSAAPTVDLFSVPEPVVQPAKTGNSGPVNNSTFDPFAAIPLNNFDGSDAFGEFTSQSDSVSPQPSNNVVSDGGHDNMNGKSLADSKVSPKKDAFQVKSGIWADSLSRGLIDLNISAPKKVNLADVGIVGGLSDGSDEKEKGPLPSFYMGRAMGSGSGLGKSAFTPSQPEIGDDFFSSLGSQQYQYGGFQK* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1961 562 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Dod08g1961 562 SUPERFAMILY ENTH/VHS domain 8 152 IPR008942 -
Dod08g1961 562 MobiDBLite consensus disorder prediction 226 281 - -
Dod08g1961 562 MobiDBLite consensus disorder prediction 179 198 - -
Dod08g1961 562 PANTHER EPSIN/ENT-RELATED 1 553 - -
Dod08g1961 562 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 553 IPR033521 GO:0006623|GO:0030276
Dod08g1961 562 SMART enth_2 26 152 IPR013809 -
Dod08g1961 562 MobiDBLite consensus disorder prediction 212 291 - -
Dod08g1961 562 CDD ENTH 28 144 - -
Dod08g1961 562 Gene3D - 24 164 IPR008942 -
Dod08g1961 562 Pfam ENTH domain 27 147 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1961 Dod-Chr8 46475538 46482591 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1961 K12471 - gmx:100809198 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1961 08 46475538 46482591 Dod08g1961 08 46475538 46482591 ECH