Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01495 ATGGCTAAGAGGGCAGTGTTAATAGGATGCAACTACCCTGGCACAAAGGCTGAATTGCGAGGGTGCATCAACGATGTGTGGAGAATGCACAAGTGCCTCACCAACATATATGGATTCTCAGAAAAAGACATCATCGTCCTCATTGACACCGATCGTTCCTACACCCAACCCACTGGCAAGAACGTAAGATTAGCCTTGTCAAAGTTGATTCGGTCGGCAAAGTCCGGCGATGTCCTCTTCGTCCATTATAGCGGCCATGGCACACGCCTGCCCGCTGAGTTGGACGAGGAGGACACCACCGGTTATGATGAGTGTATTGTTCCTACTGATATGAATCTCATCACAGATGATGATTTCAGGCAATTTGTAGACAAGGTCCCAAGGGGTTGCAAAATCACAATCGTTTCAGATTGTTGCCACAGTGGTGGCCTCATTGAAGCAACAAAGGAGCAAATAGGAGACAGCACAAATGATCATGAAGCACCCCAAAATAATTCACCTTCTCTATTTCACTTCACAAACTTTCTCCACCGAAACATGgaacaacaagatcaagaacaagaagaagaCACCATCGTGAAGAATCGTTCTCTGCCTCTTTCCACTCTCACGGACATACTCAAGGAGAAAAGTGGCAAAGAAGACATAGAACCCGGGAAAATGAGACACACCCTTTTCAACATCTTTGGGGAAGATGCAAGCCCCAGAGTGAAGAAGTTCATGAATTCAGTCATAAGCAAACTCCAACAAGGAAGAAGTGGTGAGAGTGGGGGACACAGAATAATGGGGCTGGTGGGTGATCTTGCACAACATTTGTTTGAgcaaaagctagatgaggatgatgatcatgatcatgatcatgatcatgatcatgatcttgatcatgatgatgaacgtgcaaatgcaaatgcaaCACGTGGGGGGAGCAAGAAAGAGGAAAATGCTGCATTGATCAAGCGCAACCTTTTGGATTGTGGGATTCTGTTGAGTGGTTGCCAGAGTGACCAAACTTCTGCTGATGCGTGTCCTAAGGGGAATTCTGAAACGGCTTATGGGGCATTCAGCAATGTCATACAGGGAATAATGGAAGAGAATGATGGGGCAGTCACGAATCGAGAGCTTGTTTTGAAGGCTAGGGCTATGCTTAAGAGGCAGGGTTTTTCTCAGAAGCCTGGACTGTATTGCAGTGACAGTAATGTTAATGCTCCTTTTGTGTTGAACTGA 1224 0.4191 MAKRAVLIGCNYPGTKAELRGCINDVWRMHKCLTNIYGFSEKDIIVLIDTDRSYTQPTGKNVRLALSKLIRSAKSGDVLFVHYSGHGTRLPAELDEEDTTGYDECIVPTDMNLITDDDFRQFVDKVPRGCKITIVSDCCHSGGLIEATKEQIGDSTNDHEAPQNNSPSLFHFTNFLHRNMEQQDQEQEEDTIVKNRSLPLSTLTDILKEKSGKEDIEPGKMRHTLFNIFGEDASPRVKKFMNSVISKLQQGRSGESGGHRIMGLVGDLAQHLFEQKLDEDDDHDHDHDHDHDLDHDDERANANATRGGSKKEENAALIKRNLLDCGILLSGCQSDQTSADACPKGNSETAYGAFSNVIQGIMEENDGAVTNRELVLKARAMLKRQGFSQKPGLYCSDSNVNAPFVLN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01495 407 PANTHER METACASPASE-5 1 163 - -
Cca10g01495 407 PANTHER METACASPASE-5 184 405 - -
Cca10g01495 407 SUPERFAMILY Caspase-like 4 138 IPR029030 -
Cca10g01495 407 MobiDBLite consensus disorder prediction 279 312 - -
Cca10g01495 407 Gene3D - 1 248 - -
Cca10g01495 407 Gene3D - 286 407 - -
Cca10g01495 407 Pfam Caspase domain 3 399 - -
Cca10g01495 407 PANTHER METACASPASE-4 1 163 - -
Cca10g01495 407 PANTHER METACASPASE-4 184 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01495 Cca-Chr10 23892031 23895361 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01495 10 23892031 23895361 Cca10g01495 10 23892031 23895361 ECH
Cca10g01495 10 23892031 23895361 Cca04g01659 04 26376932 26380240 PCT