Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01455 ATGGACTTCACTCCGCCGCCGATCGAGGACGGTTTCACCGCCGAGAAGCTCTTCACGCAGGGCTTCTCCTACACCTACGATGACGTCATCTTCCTCCCCCACTACATCGACTTCCCCGCCGACGCCGTCGACCTCTCCACGCGCCTCACGCGCCGCCTCCCTCTCGCCGTCCCGCTCGTCGCCTCGCCCATGGACACCGTCTCGGAGTCCGCCATGGCCGCCGCCATGGCCTCCCTCGGCGGCATCGCCGTGCTCCACTCCAAcctccccgccgccgcccaggccgcgctcctccgcgccgccaaatcccgccgcgtccccatcctctccgacccgcccttcgccgcgccctccgccGTGGTGGAGCACGCCGACGACTTCGGCGACTCCCCCTTCCTTCTGGTGACTGACACTGGGACCTCGGCCGGGAGGCTGTTAGGTTACGTCGCGAAACGCGAATGGAGGAATCAAAACGACAAGGGCTTGAAAGTGGGCGACTACATGGCGCCCCCTCCAAGGAGGGCGCAATGGAACGCCGACTTGGTGAAAATTAGTGGGATGATGGAGAGTGAGAAGAGTGGTGTGGTGGCTTTGGAGAGGGATGGTGGGGTGGTTGATTTTGTGGCGAGGGAGGATGTGGAGAGGGTGAGGGGGTACCCCAAGTTggcggcggcggcgacggtgggggcCGACGGGGAGTTTATGGTGGGGGCGGCGATTGGGACGAGGGAGGAGGATAAGGAGAGGTTGGAGCATTTGGTGAAGGGTGGAGTGAATGTTGTGGTGTTGGATAGTTCTCAAGGCAACTCAATTTATCAGTTGGATATGATCAAGTATGTCAAGAGGGTGTACCCTGATCTTGATGTGATTGGTGGGAATGTTGTGACTATGTATCAGGCTGAGAATCTCATTCAGGCTGGGGTTGATGGCTTGAGAGTTGGAATGGGGTCTGGCTCTATTTGTACCACCCAGGAGGTTTGTGCTGTGGGGCGTGGTCAGGCGACTGCTGTATACAAGGTCTCATCCATTGCTTACAAAAACGGTGTTCCTGTGATTGCTGATGGTGGCATCTCGAACTCTGGTCATATTGTTAAGGCTTTGTCACTGGGTGCGTCAACTGTTATGATGGGAAGTTTCTTAGCTGGTAGCCTTGAGGCTCCTGGGGCTTATGTATATCAGAATGGTCAACGTGTCAAAAAGTATAGAGGAATGGGTTCCCTAGAAGCCATGACTAAAGGGAGTGATGCAAGGTACTTGGGGGATACTGCAAAGCTAAAAATTGCTCAGGGAGTTGTTGGAGCTGTTAAAGATAAGGGCTCTGTCTTGAATTTCATACCATACACCTTGCAAGCAGTCAGGCAAGGGTTTCAAGATATCGGTGCCTCCTCTCTGCAGTCGGCTCATGACCTTCTACGGTCCAGGGTGATAAGGCTGGAGGTCCGGAGTGGAGCTGCACAGGTTGAAGGTGGAGTTCATGGGCTGGTTTCTTATGAAAAGAAATACTATTGA 1509 0.499 MDFTPPPIEDGFTAEKLFTQGFSYTYDDVIFLPHYIDFPADAVDLSTRLTRRLPLAVPLVASPMDTVSESAMAAAMASLGGIAVLHSNLPAAAQAALLRAAKSRRVPILSDPPFAAPSAVVEHADDFGDSPFLLVTDTGTSAGRLLGYVAKREWRNQNDKGLKVGDYMAPPPRRAQWNADLVKISGMMESEKSGVVALERDGGVVDFVAREDVERVRGYPKLAAAATVGADGEFMVGAAIGTREEDKERLEHLVKGGVNVVVLDSSQGNSIYQLDMIKYVKRVYPDLDVIGGNVVTMYQAENLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAYKNGVPVIADGGISNSGHIVKALSLGASTVMMGSFLAGSLEAPGAYVYQNGQRVKKYRGMGSLEAMTKGSDARYLGDTAKLKIAQGVVGAVKDKGSVLNFIPYTLQAVRQGFQDIGASSLQSAHDLLRSRVIRLEVRSGAAQVEGGVHGLVSYEKKYY 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01455 502 PANTHER INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 7 501 - -
Cca10g01455 502 CDD IMPDH 23 476 IPR001093 GO:0003824
Cca10g01455 502 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 7 501 IPR005990 GO:0003938|GO:0006164
Cca10g01455 502 SUPERFAMILY CBS-domain pair 132 215 IPR046342 -
Cca10g01455 502 TIGRFAM IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 23 468 IPR005990 GO:0003938|GO:0006164
Cca10g01455 502 PIRSF IMPDH 11 502 IPR005990 GO:0003938|GO:0006164
Cca10g01455 502 Pfam IMP dehydrogenase / GMP reductase domain 24 492 IPR001093 GO:0003824
Cca10g01455 502 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 311 323 IPR015875 GO:0016491
Cca10g01455 502 Gene3D Aldolase class I 11 502 IPR013785 -
Cca10g01455 502 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 23 500 IPR005990 GO:0003938|GO:0006164
Cca10g01455 502 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 12 502 - -
Cca10g01455 502 SMART IMPDH_2 22 492 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01455 10 22263274 22272679 Cca10g01455 10 22263274 22272679 ECH