Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01495 ATGCCTCAGCCTCACTCTCCCTCTTTCCTCTTCTGTCAAGAACAACACCACCATCTCCTCTCTCTCCTCTCCAAAGAGAAACCAACGCATTTCTCTCTCTCACCTCGCCACCACGCCCTACGCTTCATTTCCACGCTCTCCAACTTCCACGCTTTCTCTCCTCTCACCACTGTTCTCGCCGTCAACTACTTTCACCGCTTCGCCGCCACCCTAACGCTTCACATAGACAAGCCCTGGATCACTCACCTCGCCGCACTCGCTTGCGTCTCCCTCGCCGCCAAACTCCACGAGACACACGTGCCGCTTCTTTTCCACCTTCAAATGGAGGAATCCGAGTTTGTGTTTGAAGCAAAGACTATTCAGAGAATGGAACTTGTAGTGCTGTCCACTCTCCAATGGAGAATGAACCCTGTTACCCCTGTTTCTTTCTTTCAACATATTCTAACCACCCTTCCTATAATAGACCATCGCGAGTTCTTATGTAGATGCCAACGTGTTCTTCTCTCTGTCATTGCAGATTCTAGGGTTATGAGCTATCTTCCTTCTATATTGGCTGCTGCTATAATGATGCACGTTATTAAGGAGATTGAACCGTTTAATGCAACGGAGTACCGAATTCAGATTATTGGATTATTAAAAAGTAGCGAGGAACAAGTGAATGAGTGCTATAAACTCGTTCTGAGACGGTTAGTTTGCTGTGATGACAATGGCATTCACAATCTTGGTCAGAGGTGCAAGCGTTTATCTGAACCATGTAGTCCAGCTGGGATTATTGATGCATCTTTCAGTTGTGAGTGTTCAAGTGACTCATGGACAGTGGCATCGGTTTCAGTGGAGCCAGTGTTTAAGAGGAGCAAAGTTCAGGAGTAG 870 0.469 MPQPHSPSFLFCQEQHHHLLSLLSKEKPTHFSLSPRHHALRFISTLSNFHAFSPLTTVLAVNYFHRFAATLTLHIDKPWITHLAALACVSLAAKLHETHVPLLFHLQMEESEFVFEAKTIQRMELVVLSTLQWRMNPVTPVSFFQHILTTLPIIDHREFLCRCQRVLLSVIADSRVMSYLPSILAAAIMMHVIKEIEPFNATEYRIQIIGLLKSSEEQVNECYKLVLRRLVCCDDNGIHNLGQRCKRLSEPCSPAGIIDASFSCECSSDSWTVASVSVEPVFKRSKVQE 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01495 289 SMART Cyclin_C_2 138 256 IPR004367 -
Cca06g01495 289 Gene3D - 22 136 - -
Cca06g01495 289 SUPERFAMILY Cyclin-like 10 136 IPR036915 -
Cca06g01495 289 Gene3D - 137 224 - -
Cca06g01495 289 PANTHER CYCLIN-D3-2 15 286 - -
Cca06g01495 289 Pfam Cyclin, C-terminal domain 138 229 IPR004367 -
Cca06g01495 289 CDD CYCLIN 36 128 IPR013763 -
Cca06g01495 289 PANTHER CYCLINS 15 286 IPR039361 -
Cca06g01495 289 SMART cyclin_7 142 228 IPR013763 -
Cca06g01495 289 SMART cyclin_7 41 129 IPR013763 -
Cca06g01495 289 Pfam Cyclin, N-terminal domain 23 136 IPR006671 -
Cca06g01495 289 SUPERFAMILY Cyclin-like 120 235 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01495 Cca-Chr6 29890539 29892247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01495 16 289 Core Cell Cycle Gene Families AT5G67260 44.407 4.20e-76 236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01495 06 29890539 29892247 Cca02g02555 02 46666556 46668742 PCT
Cca11g01361 11 35202493 35203951 Cca06g01495 06 29890539 29892247 PCT