Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00416 ATGGCCACACTACTTCCTCTCCTCTTTTTTGCAAGAGTTTCAGGCCTTGCTGTGGCAGTACTTGTCCTCTTCTGGGCCCTTTCTTTCAAATCTAGCTTTCTCACTCCCTCACTTTCCCAACAAGACCTCATCTATGCAGTTCTCCATCCTCTCCTCATGGTCATTGGCTTTATCCTCTTGAGTGGAGAAGCAATTTTGGTGCACAGATGGTTACCTGGGTCAAGGGGTTTGAAGAAATTGGTGCATTTGTGGCTTCAAGGGGTGGCTTTAACTTGTGGGATCTTTGGGATTTGGACTAAGTTCCAGGGAAAGGATGGGATTGTGGCTAATTTCTTTAGCTTGCACTCATGGATGGGTTTGGTTTGTGTATCTCTCTTTGGAGCCCAGTGGTTGATTGGCTTCTTGAACTTTTGGCACAGAGGAGAGGTTCGCACTGTGAGGATAAGGATCTTACCATGGCATGTGTTCCTTGGCCTATACACTTATGCATTGGCAATAGCAACAGCAGAAACTGGATTGCTAGAGAAATTAACATTCTTGCAAACAAAGAGAAATGTAGCCAAACACAGCACTGAGTCCATGGTGGTTAATAGTTTAGGCTTGGTTCTTGCCCTTCTCAGTGGCTTTGTTATTTTGGCTGCTGTTTCACCTAAGTATCATACAATTCAAAACAAACTTTTGTACTCAGATACCAAGTGTTTGTCATCTTAA 711 0.4374 MATLLPLLFFARVSGLAVAVLVLFWALSFKSSFLTPSLSQQDLIYAVLHPLLMVIGFILLSGEAILVHRWLPGSRGLKKLVHLWLQGVALTCGIFGIWTKFQGKDGIVANFFSLHSWMGLVCVSLFGAQWLIGFLNFWHRGEVRTVRIRILPWHVFLGLYTYALAIATAETGLLEKLTFLQTKRNVAKHSTESMVVNSLGLVLALLSGFVILAAVSPKYHTIQNKLLYSDTKCLSS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00416 236 Gene3D - 1 225 - -
Cca06g00416 236 SMART 561_7 48 173 IPR006593 -
Cca06g00416 236 Pfam Eukaryotic cytochrome b561 48 179 IPR006593 -
Cca06g00416 236 ProSiteProfiles Cytochrome b561 domain profile. 10 215 IPR006593 -
Cca06g00416 236 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED 3 236 - -
Cca06g00416 236 PANTHER CYTOCHROME B561-RELATED 3 236 IPR043205 GO:0016491
Cca06g00416 236 CDD Cyt_b561_ACYB-1_like 48 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00416 Cca-Chr6 12978360 12981899 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00416 5 236 Chloroplast and Mitochondria Gene Families AT1G26100 67.932 4.23e-100 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00416 K08360 - gmx:100781811 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00416 06 12978360 12981899 Cca06g00416 06 12978360 12981899 ECH