Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00413 ATGGGCAGGGCTTCATTTTTCTCGTTACCGCTTCACATTGGAAGCCTCGTTTCTCAATCTCCGCAACCGCGTCTGGTTGTGGCAGCTTCTTCCGATGGCGCTGCCGCTTCCTCATCAACCAAGTTGCTCACTTTTCTTGGCAAAGGTGGCTCCGGCAAAACCACCGCCGCTATTCTCGCCGCTCAGCACTATGCGATGGCTGGATTGAATACATGTTTAGTGATACACAGCCAAGACACCACTGCTGACTATCTCCTCAGCTGTAAGATTGGAACTTCCCATGTCGTGTGCGGCAAGAACCTTTCTGCTGTTAGGTTGGAAACAACTAAAATGCTTCTTGAACCTCTAAAACTTCTGAAGCAAGCAGATGCCCAACTTAATATGACTCAAGGCACACTTGGAGGGATTGTTGGAGAAGAGCTTGGCATTCTGCCTGGGATGGACCCTTTTTTTTTGGTACTTGCACTTGAGAGGCTTGTAGGATTTCTGGGGATTGCAGCTTCAAAGAGTCAGCAAAATAATTTTGACCTAATAATATATGATGGTATCAGCAGTGAGGAAACCCTGCGAATCATTGGTGGAAGCAGTAAAGCAAGATTGTACTTGAAACATCTCCGCTCCTTGGCTGAGAAAACTGAACTTGGGAGATTGGCTGCTCCTTCACTACTGAGACTTGTGGATGAAGCCATGAAAATCAGTAGCAGAAAATCTTATTTCAATGGGAAAATGAGTTCAGAAATATGGGACAGTTTGGATCATATGCTGGAGAGAGGATCTTCTGCCTTCTCAAACCCGCAGAAATTTGGTTGCCTCCTTGTGATGGATCCAAACAATCCAACCTCAGTCAATTCTGCATTACGATATTGGGGATGTACAATTCAGGCCGGTGCTCAGATTTCTGGTGCTTTTGGAATCACCTCTCTGCAAGAAAATTTAGAATCATTGGAAAGAGCAAAGAAAGAGTTTTCTCCTTTGCCTTCTGCTTTCATATCAAGTTTGTCAATGAATGGCCCGGTAGATTGGAGCAGAGTTCTACTGGACACAGTCAATGAAGATGCTAGGCATCTTCTTAATTCACTGTCAGGACAATGCAATGAAATACCATTGCCAGTTAGATTTGATAATATAAAAAAATTGGTTACTCTCTTCATGCCAGGTTTTGACAAATCAGAGATCAAGCTATACCAATACAGAGGAGGATCTGAGCTTTTGGTTGAGGCAGGAGACCAAAGACGTGTCATTACTTTGCCTCCAGAAATTCAAGGAAAGGTTGGCGGAGCCAAATTTGAGGACCGAAATCTTGTTATTACGTTGCTATGA 1320 0.4402 MGRASFFSLPLHIGSLVSQSPQPRLVVAASSDGAAASSSTKLLTFLGKGGSGKTTAAILAAQHYAMAGLNTCLVIHSQDTTADYLLSCKIGTSHVVCGKNLSAVRLETTKMLLEPLKLLKQADAQLNMTQGTLGGIVGEELGILPGMDPFFLVLALERLVGFLGIAASKSQQNNFDLIIYDGISSEETLRIIGGSSKARLYLKHLRSLAEKTELGRLAAPSLLRLVDEAMKISSRKSYFNGKMSSEIWDSLDHMLERGSSAFSNPQKFGCLLVMDPNNPTSVNSALRYWGCTIQAGAQISGAFGITSLQENLESLERAKKEFSPLPSAFISSLSMNGPVDWSRVLLDTVNEDARHLLNSLSGQCNEIPLPVRFDNIKKLVTLFMPGFDKSEIKLYQYRGGSELLVEAGDQRRVITLPPEIQGKVGGAKFEDRNLVITLL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00413 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 301 IPR027417 -
Cca06g00413 439 PANTHER OS02G0711200 PROTEIN 27 438 - -
Cca06g00413 439 CDD ACD_sHsps_p23-like 380 438 - -
Cca06g00413 439 CDD ArsA 41 330 - -
Cca06g00413 439 Pfam HSP20-like domain found in ArsA 380 438 IPR040612 -
Cca06g00413 439 Pfam Anion-transporting ATPase 40 275 IPR025723 -
Cca06g00413 439 Gene3D - 367 439 IPR008978 -
Cca06g00413 439 Gene3D - 39 354 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00413 Cca-Chr6 12918817 12921936 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00413 - - gmx:100804828 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00413 06 12918817 12921936 Cca06g00413 06 12918817 12921936 ECH