Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00887 ATGATCCTAGTTAGCCATATCCAAGCTCCTTTCGGAGGAGCCATGTTTTCGAAGTGTTCCCCACACAAATTCATCACTCTGACAAACCCTCTACCACCTGCACCCAAATTCATCACTACAAGACCCTTGCATCTCACCCTCGCCAAAGCAGAAACAAACCTCGACTCGGATTCCTCTTCTCCTCCTCAAACGGTTTTCGTGACTGGCGAGGATGTTCCATTGGAGGGTGTCATCCAGTTCGAGAAACCCACCTCTTCTCCTCCTTTTGAAAAATGGGGGCGTGTGGCTCTGCTAGCTGGTGCGGATGTGTTGGCCTTGTTCTTGTTTGCCACGATTGGAAGATACAGTCATGGACTTTCTGTTTTGGACCTCGACACTCTGCGCACTGCTGACCCTTTTATAGCGGGGTGGTTTTTGGGTGCTTACTTCCTTGGAGGGTTTGGGGAGGATGGGCGTGGGATGAATGGTCTCTCCAAAGGTGTCATTGCTACTGCCAAGTCATGGGCTGTTGGGATCCCTATAGGAATAGTAATAAGGGCAGCAACAGCAGGTCATCTACCAAATTATGGTTTTGTATTTGTGAGTCTGGGAAGCACTGCTGTGTTACTTATCACATTCAGAGCATTATTATATACTATTCTTCCGGTCGACAATAGTAAGAAGAGCGATGTTTATCGCCGTGGCAGTCCCTTTGAACTCTTTGAGAGCATTGGATACCGAATCGTGATACAAAATTTGCTCTTTATTTTTGTAGCTGCTCACATCATTAGTACGGCGGTGGTAGCTATGCATTGCATGTTCAAGGCACCATACTGGAGTTTCAAATACGAGCTTTGTGCAGACTTGGGCTCAGAATATGTAGATTCAGGTTGA 873 0.4685 MILVSHIQAPFGGAMFSKCSPHKFITLTNPLPPAPKFITTRPLHLTLAKAETNLDSDSSSPPQTVFVTGEDVPLEGVIQFEKPTSSPPFEKWGRVALLAGADVLALFLFATIGRYSHGLSVLDLDTLRTADPFIAGWFLGAYFLGGFGEDGRGMNGLSKGVIATAKSWAVGIPIGIVIRAATAGHLPNYGFVFVSLGSTAVLLITFRALLYTILPVDNSKKSDVYRRGSPFELFESIGYRIVIQNLLFIFVAAHIISTAVVAMHCMFKAPYWSFKYELCADLGSEYVDSG 290
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00887 290 Pfam Protein of unknown function (DUF3054) 100 209 IPR021414 -
Cca05g00887 290 PANTHER T12C22.21 PROTEIN 16 236 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00887 - - gmx:100790514 390.963
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00887 05 24000220 24005331 Cca05g00887 05 24000220 24005331 ECH