Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00877 ATGGATATTGCTGCTCTTTTAACTTCTACTGGAATTAATATTGTAATTTGTGTGGTGTTGTTTTCATTTTATTCTATATTAAGAAAACAACCCATCAATGTTAATGTGTATTTTGGAAGAAGATTAGCCTCTCAACATTCAAAACGCATTAATCTATGTCTGGAAAGATTTCTTCCCTCCCCTAGCTGGATATGGAAAGCATGGGAAACATCTGAAGATGAGATAATGGCAATTGGTGGATTAGATGGTGTGGTTTTTGTGAGGATACTTGTTTTCAGTATTCGAGTGTTTTCCATCGCTGCTGGCATTTGTATTATTTTAGTACTTCCTATAAATTACCATGGCCAAGACAGAATTCATAAGATTATACCTTTCGAGTCGCTGGAAGTTTTTACCATCGAGAATGTCAAAGAAGGTTCAAAATGGCTTTGGGCTCATTGTCTTGCTCTATATGTCATAACATTATCGGCTTGCACTCTTCTTTATTTTGAATATAAAAGCATTACTTATCTGAGGCTACTACATATTATTGGATCACCTCCAAATCCTAGTCATTTTACAATTCTTGTTCGATCAATTCCTTGGTCATCAGAACAATCATACTGCGAAACTGTAAAAAATTTCTTTTCACACTACCATGCACCAACATATTTGTCGCACCAAATGATTTACAAGTCTGGTACAGTTCAAAAATTGAAGGATGATGCTGAACATATGTGTAAGGTCATTAAACATGCTTCAGTGGAAAAGACTTGCAAGTCCAATTTTACGCCATGTTGCTATCCTGGATTTGCAACAAATTCGTTTAAGAAGATTTCTAGTGAAATGGATAGTATACAAAGGAAAATGAGCTACAATAACATGCATTTAGATACAGGAGAAAAGGATTGTGCTGCTGCTTTTGTGTTCTTTAAAAGTCGGTATGCTGCTCTTATGGCTGCACTTGTACAACAAACATCAAATCCTATGTTATGGGTGACAGACGTAGCTCCTGAACCACATGATGTTTATTGGTCCAATATTCGCATACCATATAGGCAACTTTGGCTTCGTAAGATAGCTACATTCGTGGCCTCGGTTGCCTTCATGCTTGTGTTCCTTATCCCTGTTACATTTGTACAAGGCTTGACTCAATTAGACAAACTTCAAAAAATGTTACCATTTCTTACAGGGATACTTAAAGAGAAAATTGTGAATCAGGTGGTGACTGGTTATCTACCAAGTGTGATATTGGTTTTATTTTTGTACGCAGTTCCACCTATGATGATGTTTTTTTCTGCTGTGGAGGGTTCTATTTCTCGCAGTTCAAGGAAAAAGAGTGCATGTTGTAAAGTCTTATACTTCACAATTTGGAATGTGTTTTTTGTTAATGTATTTACTGGTTCTGTTATTAGTCAACTTTCAGTCTTTTCTAGCGTAACAGATCTTCCAAGTCAACTTGCTAAGGCAGTTCCAGCACAGTCGACTTTCTTCACAACTTATGTTTTATCATCTGGTTGGGCAAGTTTGGCATGTGAAGTTATGCAATTTTTCCCTCTTTTATGCAATATTGTTGAGAGATTCATACTTAGGCATAAGGAAGATACACTGAATGGCAACCTATCTTTTCCATACCATACAGAAGTTCCAAAAGTCCTACTGTTTGGATTCCTTGGGTTCACTTGTTCCATTTTGGCACCCTTAATATTGCCCTTCTTGTTGATCTATTTTTTCCTTGCTTACCTTGTTTACAGAAACCAGATTATCAACGTGTACATTACAAAATACGATAGTGGGGGTCAATTTTGGCCAATTGCTCACAACACAACAATCTTTTCATTGATATTTGCCCAACTTATTGCACTAGGGGTGTTTGGACTTAAGAGCTCATCAATTGCATCTGGATTCACCATTCCATTGTTGATTGATTCTTATTGA 1917 0.3652 MDIAALLTSTGINIVICVVLFSFYSILRKQPINVNVYFGRRLASQHSKRINLCLERFLPSPSWIWKAWETSEDEIMAIGGLDGVVFVRILVFSIRVFSIAAGICIILVLPINYHGQDRIHKIIPFESLEVFTIENVKEGSKWLWAHCLALYVITLSACTLLYFEYKSITYLRLLHIIGSPPNPSHFTILVRSIPWSSEQSYCETVKNFFSHYHAPTYLSHQMIYKSGTVQKLKDDAEHMCKVIKHASVEKTCKSNFTPCCYPGFATNSFKKISSEMDSIQRKMSYNNMHLDTGEKDCAAAFVFFKSRYAALMAALVQQTSNPMLWVTDVAPEPHDVYWSNIRIPYRQLWLRKIATFVASVAFMLVFLIPVTFVQGLTQLDKLQKMLPFLTGILKEKIVNQVVTGYLPSVILVLFLYAVPPMMMFFSAVEGSISRSSRKKSACCKVLYFTIWNVFFVNVFTGSVISQLSVFSSVTDLPSQLAKAVPAQSTFFTTYVLSSGWASLACEVMQFFPLLCNIVERFILRHKEDTLNGNLSFPYHTEVPKVLLFGFLGFTCSILAPLILPFLLIYFFLAYLVYRNQIINVYITKYDSGGQFWPIAHNTTIFSLIFAQLIALGVFGLKSSSIASGFTIPLLIDSY 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00877 638 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 340 IPR027815 -
Cca05g00877 638 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Cca05g00877 638 Pfam Calcium-dependent channel, 7TM region, putative phosphate 351 618 IPR003864 GO:0016020
Cca05g00877 638 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 636 - -
Cca05g00877 638 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 636 IPR045122 GO:0005227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00877 Cca-Chr5 23783619 23795727 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00877 K21989 - gmx:100796574 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00877 05 23783619 23795727 Cca05g00877 05 23783619 23795727 ECH
Cca05g00877 05 23783619 23795727 Cca03g01763 03 36749723 36761101 PCT