Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00863 ATGAAGAGAGGGAGCGAGGATGATAAGGTGGTGGGGCCCATGTTCCCAAGGCTTCATGTAAACGATGCAGAGAAAGGAGGGCCAAGAGCACCGCCAAGGAATAAGATGGCCCTCTATGAACAGTTCAGTATCCCCTCTCAAAGGTTCAATCCACGCCTTCTGCCTCTTAATCCAAATCCTTCTTCTAACAAAGTTTCTTCATCAACTCCCTCAACCCAGGGGAATGGCCACGAGAGAAGTCATGTCTATCCAGTTTGTTTGCCTTCACAAACACCTTCTCATCGAGCTGAAAGTTATATTTCTCGCCAATCTGATGGGGCAAGGTCGAACACTTCATCAGTGCAACTTGAACAGAGAAAAAATGTAGATGAAGATGACATTCATGCATACATTCGTTCAAGGGTTGGTCAACCTAGTGATAAAACACTGGAGAGTTACAAGGGGAAAAAATTCACTACTTTGGGTTCTAGGAATGTTTGTTTTTCAGTTGCAGTGCAAAATGATGGTGACAAGGATCTAACACAATTTGGCTGCGTTCCTGTTGATATGAGAAAAGATGTGAGGAGTGGGAATGAGGTGCATCCACAAGTAAGCTCAAGTAGACAGCAACGAAAAATTACTGTCAGAAACAAATCCAGTGGAGAAATTATTTACAGTCCAGTGATGCAAGTCAAGGTGATTCCAAATCAAGAGGATCAAGATTATTCTGTGCCAAATATAAGCAGGTTACATCAGGATAATGCTCCCCCACAGCAAAAGTGTGTGGCTGGGTCTCAATCCAATGACATTGAACATTGTGATGTTCTCCTTAACTCTACAAGGGAAAGGGATGTGGATAATGGAAATGCCCTTGTACCAAAAGGTTGTTTTCATTCTGCAGTGAACCAAACCCGTCTACTTGAGGCTACCATCGACGCTGAATATCATGATGCTGGGACTGGAGGCCCAATACAGAAGGGAAATTTTGATGAAAGTGGTGACGTTTCCAAGATCTCCACTGTAACAAATTTATCAAGTCTGATAGTTTCCCCTGATGATGTTGTAGGGATAATAGGTCAAAAGCATTTCTGGAAAGCAAGACGACAAATTGCCAATCAACAGAGAGTGTTTGCAGTCCAAGTGTTTGAACTGCACAGACTGATTAAGGTCCAACAGTTGATTGCTGCATCACCAGATGTTTTGCTAGAAGATGGTGCTTTTGTTGAGAATTTTCCTGTGCCAGGATCTACTCCTAAAAATCTGTCATTGGAAGTGATTGTTGAACCCCAGCAACAAAATCATAAGAGGAAAAACGATTCTGAAAAGCCTAACCATAAAACAGAATGTTCTGCTGAGAATGCAGTTAGTAGAAAAACGTCTTTTTCATCCCCGAAAAATGGTAGCCACCTTACAAATCACACCCCCTTTTCAGGAACTCCACACCAGGCAAATGTAACTTCTGATAATAGAACAAGTCCCTGGTGTTTCAATCAGTCACCTGGACATCAGTGGTTAATTCCTATCATGTCACCTTCTGAAGGGCTTGTGTACAAGCCGTATCCCGGCCCAGAATTTACAGGTACAATGCATGGAGGATGTAGCGTGCCATTCGGGCAAGCACCTATTGGCACTACTTTCATGAATCCTGCCTATCAATTCCCAGCTTCTCATCAGGTAGTTGGGGTTTCACCGTTCGTGCCTCCGGCCAGTCACGCCTACTTCCCTCCCTATGGCATGCCAGTAATGAATCAAGCAGCATCAGGGTCAGCTGTTGAACCGGTGAACCAATTTGCTGCACAAGGTTCTCACGGTCAAAATGGTCATTCATCAGTAGAGGGAGCCAATTTCAACACACATCCTAACCAAAGCTCATCCAACTTGCCAGTTCAGAGGAATGGAGCTACTTTACATGTCAAGAAATCTCAGGCATCTAAGGAGAGACAATTACAAGGGAGCACAACAAGTAGTCCTAGTGAAATGGCACAGGGAATCAGTGCAGGGAAAATTGCTGAAGGAAGTGATGCACAATCTCTTCCTCTTCCCTCTGTTGCAACCAGACAGCAAACCCAAGTCATCAAAGTTGTACCACATAACCGGAAATCTGCGACGGAATCAGCAGCTAGGATTTTTCAATCCATTCAAGAGGAGAGAAAACAACATGTCTAG 2145 0.4387 MKRGSEDDKVVGPMFPRLHVNDAEKGGPRAPPRNKMALYEQFSIPSQRFNPRLLPLNPNPSSNKVSSSTPSTQGNGHERSHVYPVCLPSQTPSHRAESYISRQSDGARSNTSSVQLEQRKNVDEDDIHAYIRSRVGQPSDKTLESYKGKKFTTLGSRNVCFSVAVQNDGDKDLTQFGCVPVDMRKDVRSGNEVHPQVSSSRQQRKITVRNKSSGEIIYSPVMQVKVIPNQEDQDYSVPNISRLHQDNAPPQQKCVAGSQSNDIEHCDVLLNSTRERDVDNGNALVPKGCFHSAVNQTRLLEATIDAEYHDAGTGGPIQKGNFDESGDVSKISTVTNLSSLIVSPDDVVGIIGQKHFWKARRQIANQQRVFAVQVFELHRLIKVQQLIAASPDVLLEDGAFVENFPVPGSTPKNLSLEVIVEPQQQNHKRKNDSEKPNHKTECSAENAVSRKTSFSSPKNGSHLTNHTPFSGTPHQANVTSDNRTSPWCFNQSPGHQWLIPIMSPSEGLVYKPYPGPEFTGTMHGGCSVPFGQAPIGTTFMNPAYQFPASHQVVGVSPFVPPASHAYFPPYGMPVMNQAASGSAVEPVNQFAAQGSHGQNGHSSVEGANFNTHPNQSSSNLPVQRNGATLHVKKSQASKERQLQGSTTSSPSEMAQGISAGKIAEGSDAQSLPLPSVATRQQTQVIKVVPHNRKSATESAARIFQSIQEERKQHV 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00863 714 MobiDBLite consensus disorder prediction 49 78 - -
Cca05g00863 714 MobiDBLite consensus disorder prediction 49 121 - -
Cca05g00863 714 MobiDBLite consensus disorder prediction 1 35 - -
Cca05g00863 714 MobiDBLite consensus disorder prediction 420 485 - -
Cca05g00863 714 MobiDBLite consensus disorder prediction 592 654 - -
Cca05g00863 714 PANTHER PROTEIN EARLY FLOWERING 3 1 713 IPR039319 GO:2000028
Cca05g00863 714 MobiDBLite consensus disorder prediction 446 485 - -
Cca05g00863 714 MobiDBLite consensus disorder prediction 91 117 - -
Cca05g00863 714 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 713 - -
Cca05g00863 714 MobiDBLite consensus disorder prediction 423 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00863 Cca-Chr5 23435958 23441218 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00863 K12125 - gmx:100788038 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00863 05 23435958 23441218 Cca05g00863 05 23435958 23441218 ECH
Cca03g01755 03 36644089 36649012 Cca05g00863 05 23435958 23441218 ECH