Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00862 ATGGGAACCACAATCTTCATTCTCTTGGGGTTGGTAGTTACTGTTCACAGTTTGTTGAACCATGGTGGCTCAAGACACAAGATTTTGGAAGTTGAGAGAAAATTAAAGCATCTTAGAAGACATTCCTTAAAAACTATTCAGAGTGAAGATGGGGATATCATTGATTGCATTGACATTAATAAGCAACCAGCCTTTGATCATCCAGCATTGAAAGGTCACAAAATCCAGATGGCTCCCACTTATGATTCAGCTAAGGAGGACACAACAGTAGGGACCAGAACTACCAGAACTAGAAATAATGCAAAGATCAGTGGCAAAAGCAAAATGATGAAGGAAAGGGTTGAAGAGTCATCTCTGATTGTGACTTCACAAGTGTGGCAGAAAAGTGGAAGATGTCCAGAGGGAACAATACCTGTTCGAAGAATACAAAAGAAAGAGGTGCTCAAGGCTCAATCAATTGAAGACTATGGAAGGAAGAAGCCAAGCTTCTCTCACCAACCTGTTGGTCAACTCAATAAGAATCTCGATTCCTTTGTACAACTTAAAAACCACTCTAAGGCAATATTGTTTACAATAGGGTACCGCTACTTGGGAGCAAAAGGAGATATTAAAGTGTGCAACCCTTTTGTTGAAAAGGACGATGAGTACAGCATTTCTCAAGTAGCTCTCTTAACAGGGCCATACAATGACTTTGAGTGCGTTCAAGCTGGATGGGCAGTCAATCCCAGTGTGTATGGAGATAGGCAAACTCGGTTATTTGTATACTGGACGGCTGATGCTTCAAAGAAAACGGGTTGCTTTGATCTGACTTGTCCCGGGTTTGTTCAAACTAGCAATGAAATTGCATTGGGTGCTGCAATTTATCCAATATCAATTCCTGGTGGGCTTCCATACAAAATAATTATTTACATCTATAAGGATCCCTATACCAATAACTGGTGGGTGCAATATGGTGAGAAGACCAACATAGGTTATTGGCCCCCAGAGTTATTTGAATCGATATGTTACAATGCTCAATCTGTGGAGTGGGGTGGTGAAGTTTACAGCTCAACCATAGGGCACATTCCTCACACTGCAACACAAATGGGTAGTGGACAATTTGGTTCAGATATTGTTGATTCTTCCTCAATAACAAGAATGAGAATTCATGACAATTCTGAGGCCTTGAAGAACCCCGAATGGGTTTATGATTACTCCGACGAATATAACTGTTATGATGTTTGGTATATAAAGGATTATGTTGAAGATCCTGAGTTCTTTTATGGGGGACCTGGAAGGAATCCTAAGTGCCCTTAA 1296 0.4066 MGTTIFILLGLVVTVHSLLNHGGSRHKILEVERKLKHLRRHSLKTIQSEDGDIIDCIDINKQPAFDHPALKGHKIQMAPTYDSAKEDTTVGTRTTRTRNNAKISGKSKMMKERVEESSLIVTSQVWQKSGRCPEGTIPVRRIQKKEVLKAQSIEDYGRKKPSFSHQPVGQLNKNLDSFVQLKNHSKAILFTIGYRYLGAKGDIKVCNPFVEKDDEYSISQVALLTGPYNDFECVQAGWAVNPSVYGDRQTRLFVYWTADASKKTGCFDLTCPGFVQTSNEIALGAAIYPISIPGGLPYKIIIYIYKDPYTNNWWVQYGEKTNIGYWPPELFESICYNAQSVEWGGEVYSSTIGHIPHTATQMGSGQFGSDIVDSSSITRMRIHDNSEALKNPEWVYDYSDEYNCYDVWYIKDYVEDPEFFYGGPGRNPKCP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00862 431 PANTHER CARBOXYL-TERMINAL PEPTIDASE 39 429 - -
Cca05g00862 431 Gene3D - 207 320 - -
Cca05g00862 431 Pfam Neprosin 214 424 IPR004314 -
Cca05g00862 431 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 39 429 - -
Cca05g00862 431 Pfam Neprosin activation peptide 45 165 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00862 Cca-Chr5 23430733 23434422 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00862 - - gmx:100816380 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00862 05 23430733 23434422 Cca05g00862 05 23430733 23434422 ECH
Cca05g00862 05 23430733 23434422 Cca03g01753 03 36633043 36636728 PCT